RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ZCWPW1Q9H0M4 648 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 ST6GALNAC4Q9H4F1 302 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 GDPD2Q9HCC8 539 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 HPSEQ9Y251 543 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 FAM208BQ5VWN6 2430 aa16.1■□□□□ 0.17
USB1-203ENST00000539737 FAM237AA0A1B0GTK4 181 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 A0A1B0GVL5 298 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 GOLGA6L4A6NEF3 574 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 KCNK5O95279 499 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 SLFN14P0C7P3 912 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 ZNF806P0C7X5 589 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 TYMPP19971 482 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 SYKP43405 635 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 MLLT6P55198 1093 aaPredicted RBP16.09■□□□□ 0.17
USB1-203ENST00000539737 MYBPC2Q14324 1141 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 ARHGAP15Q53QZ3 475 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 TMEM196Q5HYL7 178 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 SPATA1Q5VX52 437 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 WSCD1Q658N2 575 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 CACNA2D4Q7Z3S7 1137 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 FSIP1Q8NA03 581 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 MSANTD3Q96H12 275 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 SLC22A12Q96S37 553 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 FAM83CQ9BQN1 747 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 TRIM9Q9C026 710 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 RPF1Q9H9Y2 349 aaKnown RBP16.09■□□□□ 0.17
USB1-203ENST00000539737 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 MAFFQ9ULX9 164 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 MAGED2Q9UNF1 606 aaPredicted RBP16.09■□□□□ 0.17
USB1-203ENST00000539737 SLC8A2Q9UPR5 921 aa16.09■□□□□ 0.17
USB1-203ENST00000539737 KIAA1549LQ6ZVL6 1849 aa16.08■□□□□ 0.17
USB1-203ENST00000539737 PATE3B3GLJ2 98 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 TADA3O75528 432 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 ODC1P11926 461 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
USB1-203ENST00000539737 GALK1P51570 392 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 ASIC1P78348 528 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 ALCAMQ13740 583 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 RUNX3Q13761 415 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 PLK5Q496M5 336 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 PLA2G2CQ5R387 149 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 CMTM8Q8IZV2 173 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 RPLP0P6Q8NHW5 317 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 TSPAN18Q96SJ8 248 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 C7orf25Q9BPX7 421 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 PI4K2AQ9BTU6 479 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 MSTO1Q9BUK6 570 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 TPSD1Q9BZJ3 242 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
USB1-203ENST00000539737 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
USB1-203ENST00000539737 PANK4Q9NVE7 773 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 TBX20Q9UMR3 447 aa16.08■□□□□ 0.16
USB1-203ENST00000539737 C4orf47A7E2U8 309 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 PIRO00625 290 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CYB561D2O14569 222 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
USB1-203ENST00000539737 ACTN4O43707 911 aaKnown RBP16.07■□□□□ 0.16
USB1-203ENST00000539737 PIGRP01833 764 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CYP3A5P20815 502 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 ACAT1P24752 427 aaKnown RBP16.07■□□□□ 0.16
USB1-203ENST00000539737 LIMK1P53667 647 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 NLRP12P59046 1061 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 GTF2BQ00403 316 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CREB5Q02930 508 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 FOXC1Q12948 553 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 PSMD2Q13200 908 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 TAF12Q16514 161 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
USB1-203ENST00000539737 RNF43Q68DV7 783 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 STXBP4Q6ZWJ1 553 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 ITIH5Q86UX2 942 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 SFTPA1Q8IWL2 248 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CCDC34Q96HJ3 373 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CYP2S1Q96SQ9 504 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 CPSF3Q9UKF6 684 aaKnown RBP16.07■□□□□ 0.16
USB1-203ENST00000539737 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
USB1-203ENST00000539737 OGTO15294 1046 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 F11P03951 625 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 MYL1P05976 194 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 HAPLN1P10915 354 aaPredicted RBP16.06■□□□□ 0.16
USB1-203ENST00000539737 BCKDHBP21953 392 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 HOXA6P31267 233 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 NDUFA8P51970 172 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
USB1-203ENST00000539737 TMEM132DQ14C87 1099 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 VEPH1Q14D04 833 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 DDR2Q16832 855 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 ZNF720Q7Z2F6 126 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 CD302Q8IX05 232 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 GCNAQ96QF7 691 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
USB1-203ENST00000539737 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
USB1-203ENST00000539737 OBP2AQ9NY56 170 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms