RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 SALL4Q9UJQ4 1053 aa17.11■□□□□ 0.33
TRAF3-204ENST00000539721 GTF3C4Q9UKN8 822 aa17.11■□□□□ 0.33
TRAF3-204ENST00000539721 MYBPHLA2RUH7 354 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 CARNS1A5YM72 827 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 OAZ2O95190 189 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 MYBL1P10243 752 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 FGFR3P22607 806 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 MMP8P22894 467 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 NOP2P46087 812 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 BCAT1P54687 386 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 C2CD6Q53TS8 623 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 ZNF569Q5MCW4 686 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 TNS4Q8IZW8 715 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 FIBCD1Q8N539 461 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 RNF10Q8N5U6 811 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 MSANTD4Q8NCY6 345 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 OR10T2Q8NGX3 314 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 MYCBPAPQ8TBZ2 947 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 VCPIP1Q96JH7 1222 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 B3GALT6Q96L58 329 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 NOX5Q96PH1 765 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 HNRNPABQ99729 332 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 INSL6Q9Y581 213 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 TUBB4AP04350 444 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 CALB1P05937 261 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 ATP2A2P16615 1042 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 BST2Q10589 180 aaKnown RBP17.1■□□□□ 0.33
TRAF3-204ENST00000539721 PKDCCQ504Y2 493 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 RHOT2Q8IXI1 618 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 ANKRD52Q8NB46 1076 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 TMEM209Q96SK2 561 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 B3GNT5Q9BYG0 378 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 CTTNBP2NLQ9P2B4 639 aa17.1■□□□□ 0.33
TRAF3-204ENST00000539721 CLDN5O00501 218 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 CYP1A2P05177 515 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 PDE4CQ08493 712 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 PTP4A2Q12974 167 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 PDCLQ13371 301 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 MAPRE1Q15691 268 aaKnown RBP17.09■□□□□ 0.33
TRAF3-204ENST00000539721 IFI16Q16666 785 aaKnown RBP17.09■□□□□ 0.33
TRAF3-204ENST00000539721 PTPN20Q4JDL3 420 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 ZNF280DQ6N043 979 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 SYT10Q6XYQ8 523 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 PCED1BQ96HM7 432 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 ALS2CR12Q96Q35 445 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 CPXM1Q96SM3 734 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 RAD9AQ99638 391 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 TTPALQ9BTX7 342 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 SYNCQ9H7C4 482 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 ST7Q9NRC1 585 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 CAPN6Q9Y6Q1 641 aa17.09■□□□□ 0.33
TRAF3-204ENST00000539721 RRM1P23921 792 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 CDR1P51861 262 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 SLC8A3P57103 927 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 PLCB3Q01970 1234 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 RTP2Q5QGT7 225 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 FAM171BQ6P995 826 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 PHLDB2Q86SQ0 1253 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 FAM35AQ86V20 835 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 SLC35F6Q8N357 371 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.33
TRAF3-204ENST00000539721 PKMYT1Q99640 499 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 NUP85Q9BW27 656 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 OSGEPQ9NPF4 335 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 AVENQ9NQS1 362 aaPredicted RBP17.08■□□□□ 0.33
TRAF3-204ENST00000539721 SPG21Q9NZD8 308 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 CHORDC1Q9UHD1 332 aaPredicted RBP17.08■□□□□ 0.33
TRAF3-204ENST00000539721 DNAI1Q9UI46 699 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 STRIP2Q9ULQ0 834 aa17.08■□□□□ 0.33
TRAF3-204ENST00000539721 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.32
TRAF3-204ENST00000539721 H7C4K7 107 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TLL1O43897 1013 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 EFEMP2O95967 443 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 MAGEA10P43363 369 aaPredicted RBP17.07■□□□□ 0.32
TRAF3-204ENST00000539721 RGS7P49802 495 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 MRPL58Q14197 206 aaKnown RBP17.07■□□□□ 0.32
TRAF3-204ENST00000539721 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 CYP4A22Q5TCH4 519 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 LRRTM3Q86VH5 581 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 DCP1BQ8IZD4 617 aaKnown RBP17.07■□□□□ 0.32
TRAF3-204ENST00000539721 TRIM58Q8NG06 486 aa17.07■□□□□ 0.32
TRAF3-204ENST00000539721 ZNF592Q92610 1267 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms