RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 LGALS16A8MUM7 142 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 GOLGA6L19H0YKK7 550 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 IL9P15248 144 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 BDNFP23560 247 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 ALDH1A3P47895 512 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 RAD23BP54727 409 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 YWHAEP62258 255 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 TPM4P67936 248 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 AAK1Q2M2I8 961 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 FKBP15Q5T1M5 1219 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 C4orf50Q6ZRC1 276 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 TTC39CQ8N584 583 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 C12orf29Q8N999 325 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 SLC4A11Q8NBS3 891 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 SUSD6Q92537 303 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 TMEM176AQ96HP8 235 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 LSM14BQ9BX40 385 aaKnown RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 FAM124BQ9H5Z6 455 aaPredicted RBP13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 PIDD1Q9HB75 910 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 HSFX1Q9UBD0 423 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 APEX2Q9UBZ4 518 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 PCDHB4Q9Y5E5 795 aa13.53□□□□□ -0.24
TSPAN9-207ENST00000539631 RNF225M0QZC1 329 aaPredicted RBP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 XYLBO75191 536 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 CCDC130P13994 396 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ATF6P18850 670 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 MTHFRP42898 656 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 KLK7P49862 253 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 NTHL1P78549 312 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 UBXN1Q04323 297 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ATAT1Q5SQI0 421 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 SDHAF4Q5VUM1 108 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 GRASPQ7Z6J2 395 aaPredicted RBP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 GIPC2Q8TF65 315 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 FUBP3Q96I24 572 aaKnown RBP eCLIP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ASB2Q96Q27 587 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 MED10Q9BTT4 135 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ZNF518BQ9C0D4 1074 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 POMKQ9H5K3 350 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 ABCB6Q9NP58 842 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 CEP72Q9P209 647 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 DNMT3BQ9UBC3 853 aaKnown RBP13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 DNAJC12Q9UKB3 198 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
TSPAN9-207ENST00000539631 TEX33O43247 280 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 POU2F2P09086 479 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 MAGEA11P43364 429 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 EPHB3P54753 998 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 MFAP3P55082 362 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 PLD1Q13393 1074 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 CBX2Q14781 532 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 SYCP1Q15431 976 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 SMAD2Q15796 467 aaKnown RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 DDR2Q16832 855 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 KLHDC7AQ5VTJ3 777 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 TMEM270Q6UE05 265 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 FAM35AQ86V20 835 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 HS6ST3Q8IZP7 471 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 FUKQ8N0W3 1084 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 STKLD1Q8NE28 680 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 SLC2A14Q8TDB8 520 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 GPR152Q8TDT2 470 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 CYFIP2Q96F07 1278 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 ZNF512Q96ME7 567 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 HEXIM2Q96MH2 286 aaKnown RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 TMEM30AQ9NV96 361 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 FHOD1Q9Y613 1164 aa13.51□□□□□ -0.25
TSPAN9-207ENST00000539631 OBSL1O75147 1896 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 SERPINC1P01008 464 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 CALCAP01258 141 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 BMP1P13497 986 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 KRT5P13647 590 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 PTPN2P17706 415 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 TRIM21P19474 475 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 ADORA2BP29275 332 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 GRIK1P39086 918 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 RPL10AP62906 217 aaKnown RBP13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 FANCCQ00597 558 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
TSPAN9-207ENST00000539631 FILIP1LQ4L180 1135 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms