RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 KLRC4O43908 158 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 NOL4O94818 638 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 F11P03951 625 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 PFKFB1P16118 471 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 WARSP23381 471 aaKnown RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 CCNE1P24864 410 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 KPNA1P52294 538 aaPredicted RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 PSMC1P62191 440 aaKnown RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 KRT85P78386 507 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 PLCB2Q00722 1185 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 CSTF1Q05048 431 aaKnown RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 C4orf50Q6ZRC1 276 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 CMTM8Q8IZV2 173 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 GOLGA5Q8TBA6 731 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 MRPS31Q92665 395 aaKnown RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 MYLPFQ96A32 169 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 PAGE5Q96GU1 130 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 ZFYVE19Q96K21 471 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 SPATA32Q96LK8 384 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 SMG9Q9H0W8 520 aaKnown RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 CDH9Q9ULB4 789 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 OBSL1O75147 1896 aa23.78■■□□□ 1.4
SCARB1-206ENST00000539320 KIF26AQ9ULI4 1882 aaPredicted RBP23.78■■□□□ 1.4
SCARB1-206ENST00000539320 CMA1P23946 247 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 AVPR1AP37288 418 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 SOX9P48436 509 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 MTAPQ13126 283 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 FAM171BQ6P995 826 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 CELF5Q8N6W0 485 aaKnown RBP23.77■■□□□ 1.4
SCARB1-206ENST00000539320 KIAA0895Q8NCT3 520 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 MMS19Q96T76 1030 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 USP25Q9UHP3 1055 aa23.77■■□□□ 1.4
SCARB1-206ENST00000539320 A0A1B0GVL5 298 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 EXOC3O60645 756 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 KINO60870 393 aaKnown RBP23.76■■□□□ 1.39
SCARB1-206ENST00000539320 TADA3O75528 432 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 CTHP32929 405 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 MAGEA11P43364 429 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 MAPRE1Q15691 268 aaKnown RBP23.76■■□□□ 1.39
SCARB1-206ENST00000539320 SCN4BQ8IWT1 228 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 MAB21L3Q8N8X9 362 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 TRMT2BQ96GJ1 504 aaKnown RBP23.76■■□□□ 1.39
SCARB1-206ENST00000539320 CHAMP1Q96JM3 812 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 GZF1Q9H116 711 aaPredicted RBP23.76■■□□□ 1.39
SCARB1-206ENST00000539320 KIF9Q9HAQ2 790 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 LMAN1LQ9HAT1 526 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 CRTAC1Q9NQ79 661 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 THG1LQ9NWX6 298 aaKnown RBP23.76■■□□□ 1.39
SCARB1-206ENST00000539320 ZDHHC9Q9Y397 364 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 PCDHGA2Q9Y5H1 932 aa23.76■■□□□ 1.39
SCARB1-206ENST00000539320 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 SOBPA7XYQ1 873 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 SPECC1L-ADORA2AF8WAN1 911 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 ATP2C2O75185 946 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 LMO2P25791 158 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 TNNC1P63316 161 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 STK4Q13043 487 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 KMT5BQ4FZB7 885 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 TXNDC8Q6A555 127 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 MON1AQ86VX9 555 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 RALGPS2Q86X27 583 aaPredicted RBP23.75■■□□□ 1.39
SCARB1-206ENST00000539320 MYRFLQ96LU7 910 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 GTSE1Q9NYZ3 720 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 HPSEQ9Y251 543 aa23.75■■□□□ 1.39
SCARB1-206ENST00000539320 ZNF638Q14966 1978 aaKnown RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 STAU1O95793 577 aaKnown RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 CST3P01034 146 aaPredicted RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 CHRNB1P11230 501 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 TRPC3Q13507 836 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 LRRC32Q14392 662 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 VSTM1Q6UX27 236 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 TTC8Q8TAM2 541 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 USP13Q92995 863 aaPredicted RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 MRPL45Q9BRJ2 306 aaKnown RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 SNX25Q9H3E2 840 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 ZSCAN32Q9NX65 697 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 MAGEC2Q9UBF1 373 aaPredicted RBP23.74■■□□□ 1.39
SCARB1-206ENST00000539320 CCL26Q9Y258 94 aa23.74■■□□□ 1.39
SCARB1-206ENST00000539320 PTPRDP23468 1912 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 TACC1O75410 805 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 MYL1P05976 194 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 PDGFRBP09619 1106 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 TNK2Q07912 1038 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 PSMD2Q13200 908 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 TXNDC11Q6PKC3 985 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 TSSK4Q6SA08 328 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 ZNF516Q92618 1163 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 NELL1Q92832 810 aa23.73■■□□□ 1.39
SCARB1-206ENST00000539320 BDNFP23560 247 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 ATICP31939 592 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 SYKP43405 635 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 CASP4P49662 377 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 CCR3P51677 355 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 MYL6P60660 151 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 CYP27A1Q02318 531 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 BIRC3Q13489 604 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 ZNF268Q14587 947 aaPredicted RBP23.72■■□□□ 1.39
SCARB1-206ENST00000539320 ITPRIPL2Q3MIP1 535 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 WDR72Q3MJ13 1102 aa23.72■■□□□ 1.39
SCARB1-206ENST00000539320 MAMSTRQ6ZN01 415 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms