RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 OR10T2Q8NGX3 314 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 SPPL2BQ8TCT7 592 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 HMGB4Q8WW32 186 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 BHMT2Q9H2M3 363 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
YBX3-207ENST00000539204 A0A087WV48 116 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 ANTXRLA6NF34 631 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 MYMKA6NI61 221 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 SGK1O00141 431 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CLDN3O15551 220 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 TOM1L1O75674 476 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 NFATC1O95644 943 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CLTAP09496 248 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CSH1P0DML2 217 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CSH2P0DML3 217 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 HNRNPLP14866 589 aaKnown RBP eCLIP13.02□□□□□ -0.33
YBX3-207ENST00000539204 MUTP22033 750 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 ZNF33AQ06730 810 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CYP4F3Q08477 520 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 ZNF77Q15935 545 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
YBX3-207ENST00000539204 EOGTQ5NDL2 527 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 SLC36A4Q6YBV0 504 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 TMPRSS7Q7RTY8 843 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 NAXDQ8IW45 347 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 CRELD1Q96HD1 420 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 PNMA5Q96PV4 448 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 TRPC7Q9HCX4 862 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 DSEQ9UL01 958 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 RAI2Q9Y5P3 530 aa13.02□□□□□ -0.33
YBX3-207ENST00000539204 ADAMTS9Q9P2N4 1935 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 PLXNB3Q9ULL4 1909 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 CITO14578 2027 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TRAV19A0A0A6YYK7 116 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TRABD2BA6NFA1 517 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 C1QL1O75973 258 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 KLF8O95600 359 aaPredicted RBP13.01□□□□□ -0.33
YBX3-207ENST00000539204 CKMP06732 381 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 CXCL8P10145 99 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TIE1P35590 1138 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 OPRD1P41143 372 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 MATR3P43243 847 aaKnown RBP eCLIP13.01□□□□□ -0.33
YBX3-207ENST00000539204 PPP2R3AQ06190 1150 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 STRN3Q13033 797 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 NOLC1Q14978 699 aaKnown RBP eCLIP13.01□□□□□ -0.33
YBX3-207ENST00000539204 ERICH6BQ5W0A0 696 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 LRRTM3Q86VH5 581 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 IL17RCQ8NAC3 791 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 SPRYD3Q8NCJ5 442 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 LSM14AQ8ND56 463 aaKnown RBP13.01□□□□□ -0.33
YBX3-207ENST00000539204 WASF1Q92558 559 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TNFRSF25Q93038 417 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 KIF2CQ99661 725 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 TMEM60Q9H2L4 133 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
YBX3-207ENST00000539204 ABI2Q9NYB9 513 aaPredicted RBP13.01□□□□□ -0.33
YBX3-207ENST00000539204 UXTQ9UBK9 157 aaPredicted RBP13.01□□□□□ -0.33
YBX3-207ENST00000539204 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
YBX3-207ENST00000539204 SHROOM3Q8TF72 1996 aa13□□□□□ -0.33
YBX3-207ENST00000539204 STK36Q9NRP7 1315 aa13□□□□□ -0.33
YBX3-207ENST00000539204 A0A1W2PQD8 194 aa13□□□□□ -0.33
YBX3-207ENST00000539204 TCRBV21S2A2A0A5A6 115 aa13□□□□□ -0.33
YBX3-207ENST00000539204 LACTBL1A8MY62 500 aa13□□□□□ -0.33
YBX3-207ENST00000539204 PPEF2O14830 753 aa13□□□□□ -0.33
YBX3-207ENST00000539204 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
YBX3-207ENST00000539204 GJB3O75712 270 aa13□□□□□ -0.33
YBX3-207ENST00000539204 CYP11A1P05108 521 aa13□□□□□ -0.33
YBX3-207ENST00000539204 NEFLP07196 543 aa13□□□□□ -0.33
YBX3-207ENST00000539204 ABCG1P45844 678 aa13□□□□□ -0.33
YBX3-207ENST00000539204 GUCY2FP51841 1108 aa13□□□□□ -0.33
YBX3-207ENST00000539204 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
YBX3-207ENST00000539204 GLRX5Q86SX6 157 aa13□□□□□ -0.33
YBX3-207ENST00000539204 DCP1BQ8IZD4 617 aaKnown RBP13□□□□□ -0.33
YBX3-207ENST00000539204 SH3RF2Q8TEC5 729 aa13□□□□□ -0.33
YBX3-207ENST00000539204 DRC1Q96MC2 740 aa13□□□□□ -0.33
YBX3-207ENST00000539204 PNKPQ96T60 521 aa13□□□□□ -0.33
YBX3-207ENST00000539204 NTPCRQ9BSD7 190 aaKnown RBP13□□□□□ -0.33
YBX3-207ENST00000539204 FAM124BQ9H5Z6 455 aaPredicted RBP13□□□□□ -0.33
YBX3-207ENST00000539204 TMEM206Q9H813 350 aa13□□□□□ -0.33
YBX3-207ENST00000539204 C17orf75Q9HAS0 396 aa13□□□□□ -0.33
YBX3-207ENST00000539204 KCNG1Q9UIX4 513 aa13□□□□□ -0.33
YBX3-207ENST00000539204 KIAA1024Q9UPX6 916 aa13□□□□□ -0.33
YBX3-207ENST00000539204 PCDHB5Q9Y5E4 795 aa13□□□□□ -0.33
YBX3-207ENST00000539204 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
YBX3-207ENST00000539204 A0A0A0MRY4 1105 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 WNT7AO00755 349 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 SLC16A4O15374 487 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 HIP1RO75146 1068 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 PRPF40AO75400 957 aaKnown RBP12.99□□□□□ -0.33
YBX3-207ENST00000539204 CDC45O75419 566 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 MCM7P33993 719 aa12.99□□□□□ -0.33
YBX3-207ENST00000539204 CCT6AP40227 531 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms