RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 KIAA1524Q8TCG1 905 aa15□□□□□ -0.01
CD4-208ENST00000538827 ZSWIM1Q9BR11 485 aa15□□□□□ -0.01
CD4-208ENST00000538827 HERC2P3Q9BVR0 1158 aa15□□□□□ -0.01
CD4-208ENST00000538827 TAS2R14Q9NYV8 317 aa15□□□□□ -0.01
CD4-208ENST00000538827 SPG21Q9NZD8 308 aa15□□□□□ -0.01
CD4-208ENST00000538827 HESX1Q9UBX0 185 aa15□□□□□ -0.01
CD4-208ENST00000538827 TSPAN16Q9UKR8 245 aa15□□□□□ -0.01
CD4-208ENST00000538827 CDH9Q9ULB4 789 aa15□□□□□ -0.01
CD4-208ENST00000538827 WDR3Q9UNX4 943 aaKnown RBP eCLIP15□□□□□ -0.01
CD4-208ENST00000538827 TFR2Q9UP52 801 aa15□□□□□ -0.01
CD4-208ENST00000538827 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
CD4-208ENST00000538827 CARNS1A5YM72 827 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 GPR37L1O60883 481 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 LCA5LO95447 670 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 PTPN1P18031 435 aaKnown RBP14.99□□□□□ -0.01
CD4-208ENST00000538827 ABCB4P21439 1286 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CA8P35219 290 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 NSFP46459 744 aaKnown RBP14.99□□□□□ -0.01
CD4-208ENST00000538827 VAV2P52735 878 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 NOMO3P69849 1222 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 STILQ15468 1287 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CCDC85BQ15834 202 aaPredicted RBP14.99□□□□□ -0.01
CD4-208ENST00000538827 ARHGAP29Q52LW3 1261 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 RTP2Q5QGT7 225 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 RASIP1Q5U651 963 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CCAR2Q8N163 923 aaKnown RBP14.99□□□□□ -0.01
CD4-208ENST00000538827 TXLNBQ8N3L3 684 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 TMEM35BQ8NCS4 154 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 OR10T2Q8NGX3 314 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 SLC30A5Q8TAD4 765 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CPA5Q8WXQ8 436 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 MYLPFQ96A32 169 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CYFIP2Q96F07 1278 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 PPP1R13BQ96KQ4 1090 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 TMEM209Q96SK2 561 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 RTP3Q9BQQ7 232 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 PACSIN1Q9BY11 444 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 CRTAC1Q9NQ79 661 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 KIAA1257Q9ULG3 409 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 NENFQ9UMX5 172 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 PCDHGC3Q9UN70 934 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 PTPRDP23468 1912 aa14.99□□□□□ -0.01
CD4-208ENST00000538827 ATP8B3O60423 1300 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 A0A0U1RQJ8 604 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 CLDN5O00501 218 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 C2CD2LO14523 706 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 RTN2O75298 545 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 CSPG5O95196 566 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 LSM8O95777 96 aaKnown RBP14.98□□□□□ -0.01
CD4-208ENST00000538827 H2AFZP0C0S5 128 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 OR4Q2P0C623 313 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 FGFR3P22607 806 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 IGFBP4P22692 258 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 ARPP19P56211 112 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 KIAA0319Q5VV43 1072 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 ARHGAP17Q68EM7 881 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 KIAA1841Q6NSI8 718 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 H2AFVQ71UI9 128 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 FAM35AQ86V20 835 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 CRYBG2Q8N1P7 616 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 SLC2A14Q8TDB8 520 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 SP7Q8TDD2 431 aaPredicted RBP14.98□□□□□ -0.01
CD4-208ENST00000538827 ATRIPQ8WXE1 791 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 RIN2Q8WYP3 895 aaPredicted RBP14.98□□□□□ -0.01
CD4-208ENST00000538827 SECISBP2LQ93073 1101 aaKnown RBP14.98□□□□□ -0.01
CD4-208ENST00000538827 ZNF653Q96CK0 615 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 C11orf70Q9BRQ4 267 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 TTPALQ9BTX7 342 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 VN1R3Q9BXE9 311 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 PBX4Q9BYU1 374 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 EPHX3Q9H6B9 360 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 LZTFL1Q9NQ48 299 aa14.98□□□□□ -0.01
CD4-208ENST00000538827 MYBPHLA2RUH7 354 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 ESPNB1AK53 854 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 H7C4K7 107 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 ATMINO43313 823 aaPredicted RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 CYP1A1P04798 512 aaPredicted RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 URODP06132 367 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 CPB1P15086 417 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 MYOGP15173 224 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 GLUD2P49448 558 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 BCAT1P54687 386 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 CENPCQ03188 943 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 ADGRE1Q14246 886 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 CNGA2Q16280 664 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 PSMD5Q16401 504 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 USP41Q3LFD5 358 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 SLC39A12Q504Y0 691 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 C10orf76Q5T2E6 689 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 ACAD10Q6JQN1 1059 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 PRSS55Q6UWB4 352 aaPredicted RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 LCLAT1Q6UWP7 414 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 TAS1R1Q7RTX1 841 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 MSANTD4Q8NCY6 345 aa14.97□□□□□ -0.01
CD4-208ENST00000538827 IPO4Q8TEX9 1081 aaKnown RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 CTNNBL1Q8WYA6 563 aaPredicted RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 NECAB3Q96P71 396 aaPredicted RBP14.97□□□□□ -0.01
CD4-208ENST00000538827 ACBD6Q9BR61 282 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms