RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SPA17Q15506 151 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 ZNF394Q53GI3 561 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 TMEM270Q6UE05 265 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 KIAA1328Q86T90 577 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 FMNL3Q8IVF7 1028 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 MRPL43Q8N983 215 aaKnown RBP18.31■□□□□ 0.52
CLN6-202ENST00000538696 RBBP8NLQ8NC74 664 aaPredicted RBP18.31■□□□□ 0.52
CLN6-202ENST00000538696 MRPL38Q96DV4 380 aaKnown RBP18.31■□□□□ 0.52
CLN6-202ENST00000538696 PKMYT1Q99640 499 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 ACBD6Q9BR61 282 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-202ENST00000538696 ZCWPW1Q9H0M4 648 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 LZTFL1Q9NQ48 299 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLN6-202ENST00000538696 FNIP2Q9P278 1114 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 CDH9Q9ULB4 789 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 CDY1Q9Y6F8 540 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 MYH10P35580 1976 aa18.31■□□□□ 0.52
CLN6-202ENST00000538696 A0A087X0T9 212 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 TEX28O15482 410 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 CYP26A1O43174 497 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 ATP2C2O75185 946 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 ABL1P00519 1130 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 CNPP09543 421 aaKnown RBP18.3■□□□□ 0.52
CLN6-202ENST00000538696 FAM228BP0C875 321 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 KRT5P13647 590 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 ANXA13P27216 316 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 VAV2P52735 878 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 RAD23BP54727 409 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 BMS1Q14692 1282 aaKnown RBP18.3■□□□□ 0.52
CLN6-202ENST00000538696 SLC8B1Q6J4K2 584 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 PDE12Q6L8Q7 609 aaKnown RBP18.3■□□□□ 0.52
CLN6-202ENST00000538696 ADGRD2Q7Z7M1 963 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 ACOT1Q86TX2 421 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 GLYCTKQ8IVS8 523 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 SLC4A11Q8NBS3 891 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 MICAL1Q8TDZ2 1067 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 SLC20A1Q8WUM9 679 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 KLHL5Q96PQ7 755 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 LPIN3Q9BQK8 851 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 NT5C1AQ9BXI3 368 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 OXCT2Q9BYC2 517 aaPredicted RBP18.3■□□□□ 0.52
CLN6-202ENST00000538696 CRTAC1Q9NQ79 661 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 TRIM10Q9UDY6 481 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 NENFQ9UMX5 172 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
CLN6-202ENST00000538696 DDX3XO00571 662 aaKnown RBP eCLIP18.29■□□□□ 0.522e-13■■■□□ 16.8
CLN6-202ENST00000538696 CCDC172P0C7W6 258 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 MAGEA1P43355 309 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 NDUFV1P49821 464 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 TSPY1Q01534 308 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 ROR1Q01973 937 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 SLC18A3Q16572 532 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 PTPROQ16827 1216 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 DNTTIP2Q5QJE6 756 aaKnown RBP18.29■□□□□ 0.52
CLN6-202ENST00000538696 LRRTM3Q86VH5 581 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 TMEM176AQ96HP8 235 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 EMILIN2Q9BXX0 1053 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 TMLHEQ9NVH6 421 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 ADAMTS1Q9UHI8 967 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 PATJQ8NI35 1801 aa18.29■□□□□ 0.52
CLN6-202ENST00000538696 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 MYBPHLA2RUH7 354 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 CALCAP01258 141 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 CPB1P15086 417 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 PTPN1P18031 435 aaKnown RBP18.28■□□□□ 0.52
CLN6-202ENST00000538696 OR1D2P34982 312 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 ARPP19P56211 112 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 ADGRE1Q14246 886 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 ARHGAP29Q52LW3 1261 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 MDH1BQ5I0G3 518 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 SMYD5Q6GMV2 418 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 GPR153Q6NV75 609 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 FAM171BQ6P995 826 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 NOP9Q86U38 636 aaKnown RBP18.28■□□□□ 0.52
CLN6-202ENST00000538696 CRYBG2Q8N1P7 616 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 AGPAT1Q99943 283 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 LACRTQ9GZZ8 138 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 ACP6Q9NPH0 428 aa18.28■□□□□ 0.52
CLN6-202ENST00000538696 PRRC2BQ5JSZ5 2229 aaKnown RBP18.27■□□□□ 0.52
CLN6-202ENST00000538696 VNN2O95498 520 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 PAEPP09466 180 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 CHRNB2P17787 502 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 RAB33AQ14088 237 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 SLC39A12Q504Y0 691 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 Q7L0L9 218 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 SLC47A2Q86VL8 602 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 VPS36Q86VN1 386 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 DCP1BQ8IZD4 617 aaKnown RBP18.27■□□□□ 0.52
CLN6-202ENST00000538696 SLC30A5Q8TAD4 765 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 MYLPFQ96A32 169 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 TNIP3Q96KP6 325 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 NOCTQ9UK39 431 aaKnown RBP18.27■□□□□ 0.52
CLN6-202ENST00000538696 GTF3C4Q9UKN8 822 aa18.27■□□□□ 0.52
CLN6-202ENST00000538696 MTMR11A4FU01 709 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms