RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 RSL1D1O76021 490 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 BMP10O95393 424 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 INHBBP09529 407 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 P4HA1P13674 534 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ACAT1P24752 427 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 IVDP26440 423 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 STAT2P52630 851 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ACAP1Q15027 740 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 PRKD1Q15139 912 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 PKN2Q16513 984 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 HP1BP3Q5SSJ5 553 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 CCSAPQ6IQ19 270 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 NANOGP8Q6NSW7 305 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 DPY19L2P1Q6NXN4 242 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 CAPN12Q6ZSI9 719 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 GPR141Q7Z602 305 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ELMOD1Q8N336 334 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 LARP4BQ92615 738 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 TAMM41Q96BW9 452 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 PRR11Q96HE9 360 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 INO80BQ9C086 356 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 FKBP14Q9NWM8 211 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 HOXC10Q9NYD6 342 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 TMA7Q9Y2S6 64 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 AP4S1Q9Y587 144 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 MYMKA6NI61 221 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 GNPATO15228 680 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 KRT6AP02538 564 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 KRT6BP04259 564 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ENO2P09104 434 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 CHRNB2P17787 502 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 MAGEA4P43358 317 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 BOLA3Q53S33 107 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ITPRIPL1Q6GPH6 555 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 TTC7BQ86TV6 843 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ZNF276Q8N554 614 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 CPSF7Q8N684 471 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 GSDMBQ8TAX9 411 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ACTRT2Q8TDY3 377 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 ZNF641Q96N77 438 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 ZSCAN10Q96SZ4 725 aaPredicted RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 CNOT11Q9UKZ1 510 aaKnown RBP12.98□□□□□ -0.33
USP3-203ENST00000538686 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
USP3-203ENST00000538686 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 SF3B1O75533 1304 aaKnown RBP eCLIP12.97□□□□□ -0.337e-8■■■■■ 30.2
USP3-203ENST00000538686 GTPBP10A4D1E9 387 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 KRBA1A5PL33 1030 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 H0YJX3 145 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 SLC22A1O15245 554 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 PSMC3P17980 439 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 AOC1P19801 751 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 TCEA1P23193 301 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 GCAP28676 217 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 MCAMP43121 646 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 KDSRQ06136 332 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 TROAPQ12815 778 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 TRIP13Q15645 432 aaPredicted RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 ZBED5Q49AG3 693 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 SGO2Q562F6 1265 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ZFP1Q6P2D0 407 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 PGM2L1Q6PCE3 622 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 AMIGO2Q86SJ2 522 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 KBTBD6Q86V97 674 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 PLBD2Q8NHP8 589 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 TBC1D15Q8TC07 691 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ACMSDQ8TDX5 336 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 SLC2A11Q9BYW1 496 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ARMCX1Q9P291 453 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 PPARGC1AQ9UBK2 798 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 BCAP29Q9UHQ4 241 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 DCCP43146 1447 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 AREL1O15033 823 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 SPOPO43791 374 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A9O60656 530 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 H6PDO95479 791 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 NAT2P11245 290 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A6P19224 532 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A1P22309 533 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A4P22310 534 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ADRA1DP25100 572 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A3P35503 534 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 UGT1A5P35504 534 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 CPOXP36551 454 aa12.97□□□□□ -0.33
USP3-203ENST00000538686 ADCY8P40145 1251 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms