RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 ORC1Q13415 861 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 MAPRE1Q15691 268 aaKnown RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 NFE2Q16621 373 aaPredicted RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 CCDC142Q17RM4 750 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 SLC39A12Q504Y0 691 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 ZNF394Q53GI3 561 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 MDH1BQ5I0G3 518 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 ARHGAP17Q68EM7 881 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 IRF2BP2Q7Z5L9 587 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 FUKQ8N0W3 1084 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 MICAL1Q8TDZ2 1067 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 C2orf15Q8WU43 125 aaKnown RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 SYN2Q92777 582 aaPredicted RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 PCED1BQ96HM7 432 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 DNAJC7Q99615 494 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 HNRNPABQ99729 332 aaKnown RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 LPIN3Q9BQK8 851 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 ZSWIM1Q9BR11 485 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 EMILIN2Q9BXX0 1053 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 NUCKS1Q9H1E3 243 aaKnown RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 PRDM12Q9H4Q4 367 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 TMLHEQ9NVH6 421 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 AIPL1Q9NZN9 384 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 HSFX1Q9UBD0 423 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 GTF3C4Q9UKN8 822 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 MAFFQ9ULX9 164 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 LUC7L2Q9Y383 392 aaKnown RBP8.54□□□□□ -1.04
CIT-209ENST00000538073 CDH23Q9H251 3354 aa8.54□□□□□ -1.04
CIT-209ENST00000538073 MTCL1Q9Y4B5 1905 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 O00370 1275 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 TGM5O43548 720 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 MFAP3LO75121 409 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CLASP2O75122 1294 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 GFPT2O94808 682 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CCDC130P13994 396 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ATF2P15336 505 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 FERP16591 822 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 GNA15P30679 374 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CA8P35219 290 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 KRT9P35527 623 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 USP8P40818 1118 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 PRKCIP41743 596 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CLCN4P51793 760 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 BPIFB4P59827 614 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 PTK2Q05397 1052 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 KCNC3Q14003 757 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 STILQ15468 1287 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 MEA1Q16626 185 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 DUSP6Q16828 381 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CFAP221Q4G0U5 840 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 SGO2Q562F6 1265 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 PPP1R26Q5T8A7 1209 aaPredicted RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 SFMBT2Q5VUG0 894 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 E4F1Q66K89 784 aaPredicted RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 C4orf50Q6ZRC1 276 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 PAQR9Q6ZVX9 377 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ADGRD2Q7Z7M1 963 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 SLC47A2Q86VL8 602 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 PPFIBP1Q86W92 1011 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ZNF677Q86XU0 584 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CNGA4Q8IV77 575 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 FMNL3Q8IVF7 1028 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 GLYCTKQ8IVS8 523 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 SPPL2BQ8TCT7 592 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 EPS8L1Q8TE68 723 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 SLC22A17Q8WUG5 538 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 HDAC7Q8WUI4 952 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 CPLX3Q8WVH0 158 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ZNF606Q8WXB4 792 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 TFAP2BQ92481 460 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 DDX1Q92499 740 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 MYLPFQ96A32 169 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 KCTD12Q96CX2 325 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 CYFIP2Q96F07 1278 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 FUBP3Q96I24 572 aaKnown RBP eCLIP8.53□□□□□ -1.04
CIT-209ENST00000538073 HEXIM2Q96MH2 286 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 CDCA3Q99618 268 aaPredicted RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 SYT11Q9BT88 431 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 B3GNT5Q9BYG0 378 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 ABCB6Q9NP58 842 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ACP6Q9NPH0 428 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 ABHD10Q9NUJ1 306 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 IMPACTQ9P2X3 320 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 AFF4Q9UHB7 1163 aaKnown RBP8.53□□□□□ -1.04
CIT-209ENST00000538073 PCDHB5Q9Y5E4 795 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 MTCH2Q9Y6C9 303 aa8.53□□□□□ -1.04
CIT-209ENST00000538073 EYSQ5T1H1 3165 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 AKR1B15C9JRZ8 316 aaPredicted RBP8.52□□□□□ -1.05
CIT-209ENST00000538073 CSPG5O95196 566 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 SEC24AO95486 1093 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 CALCAP01258 141 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 TPM1P09493 284 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 CCDC172P0C7W6 258 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 CD19P15391 556 aa8.52□□□□□ -1.05
CIT-209ENST00000538073 CYP11B1P15538 503 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms