RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 GJB5O95377 273 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 SETSIPP0DME0 302 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 MYBL1P10243 752 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 ALDH7A1P49419 539 aaKnown RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 PDE4CQ08493 712 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 PTPN20Q4JDL3 420 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 C2CD6Q53TS8 623 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 MDH1BQ5I0G3 518 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 PLEKHA7Q6IQ23 1121 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 LLGL2Q6P1M3 1020 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 FUT10Q6P4F1 479 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 KCNT2Q6UVM3 1135 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 MMS22LQ6ZRQ5 1243 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 PHLDB2Q86SQ0 1253 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 NLRC5Q86WI3 1866 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 RNF168Q8IYW5 571 aaPredicted RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 OR10T2Q8NGX3 314 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 SLC2A14Q8TDB8 520 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 STK32AQ8WU08 396 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 DPF3Q92784 378 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 IGSF21Q96ID5 467 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 NOX5Q96PH1 765 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 C11orf70Q9BRQ4 267 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 VN1R3Q9BXE9 311 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 DUSP16Q9BY84 665 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 CNOT8Q9UFF9 292 aaKnown RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 DNAI1Q9UI46 699 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 MRPL42Q9Y6G3 142 aaKnown RBP12.41□□□□□ -0.42
SPARC-207ENST00000537849 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
SPARC-207ENST00000537849 KIAA1671Q9BY89 1806 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 GRID2IPA4D2P6 1211 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 CCDC85CA6NKD9 419 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 ZBBXA8MT70 800 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 M0QYV0 167 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 RRM1P23921 792 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 ADORA2BP29275 332 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 NOP2P46087 812 aaKnown RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 PLCB3Q01970 1234 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 YWHAHQ04917 246 aaPredicted RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 ELAVL2Q12926 359 aaKnown RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 ZNF268Q14587 947 aaPredicted RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 INTS6LQ5JSJ4 861 aaKnown RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
SPARC-207ENST00000537849 LIN9Q5TKA1 542 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 PMF1Q6P1K2 205 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 RHOT2Q8IXI1 618 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 LRRC57Q8N9N7 239 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 PHOSPHO2Q8TCD6 241 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 ZNF653Q96CK0 615 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 C18orf8Q96DM3 657 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 TRIM11Q96F44 468 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 CPXM1Q96SM3 734 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 ABCB6Q9NP58 842 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 HESX1Q9UBX0 185 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 TJP2Q9UDY2 1190 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 PCDHGC5Q9Y5F6 944 aa12.4□□□□□ -0.42
SPARC-207ENST00000537849 ATMINO43313 823 aaPredicted RBP12.39□□□□□ -0.43
SPARC-207ENST00000537849 PALMO75781 387 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CAPN15O75808 1086 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 ERBB2P04626 1255 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CALB1P05937 261 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CASQ1P31415 396 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 PDCLQ13371 301 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 IFI16Q16666 785 aaKnown RBP12.39□□□□□ -0.43
SPARC-207ENST00000537849 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.39□□□□□ -0.43
SPARC-207ENST00000537849 XYLT1Q86Y38 959 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 HERC6Q8IVU3 1022 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 COLGALT1Q8NBJ5 622 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 TRIM58Q8NG06 486 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 PCED1BQ96HM7 432 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CALR3Q96L12 384 aaKnown RBP12.39□□□□□ -0.43
SPARC-207ENST00000537849 B3GALT6Q96L58 329 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 ZNF558Q96NG5 402 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 YME1L1Q96TA2 773 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 RAD9AQ99638 391 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 LBHD1Q9BQE6 289 aaPredicted RBP12.39□□□□□ -0.43
SPARC-207ENST00000537849 NUP85Q9BW27 656 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 UBXN6Q9BZV1 441 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 ZCWPW1Q9H0M4 648 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CHST7Q9NS84 486 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
SPARC-207ENST00000537849 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms