RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 FAM131BQ86XD5 332 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 PPHLN1Q8NEY8 458 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 MKL1Q969V6 931 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 MTMR9Q96QG7 549 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 MMTAG2Q9BU76 263 aaKnown RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 ASCC2Q9H1I8 757 aaPredicted RBP10.51□□□□□ -0.73
GGA3-201ENST00000537686 STOML1Q9UBI4 398 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 KIAA1257Q9ULG3 409 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 ARL2BPQ9Y2Y0 163 aa10.51□□□□□ -0.73
GGA3-201ENST00000537686 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.734e-7■■■■□ 20.1
GGA3-201ENST00000537686 STIP1P31948 543 aaKnown RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 HSD17B3P37058 310 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 FCGRTP55899 365 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 ESRRGP62508 458 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 HSP90AA5PQ58FG0 334 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 MIB1Q86YT6 1006 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 TTC30BQ8N4P2 665 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 EPN3Q9H201 632 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 KRT82Q9NSB4 513 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 RGS17Q9UGC6 210 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 LSM7Q9UK45 103 aaKnown RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 C2CD2LO14523 706 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 CCDC22O60826 627 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 PMPCBO75439 489 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 CYBBP04839 570 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 SNRPAP09012 282 aaKnown RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 PTGER2P43116 358 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 STX3Q13277 289 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 SHROOM1Q2M3G4 852 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 SZRD1Q7Z422 152 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 CD302Q8IX05 232 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 DDIASQ8IXT1 998 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 RNF217Q8TC41 542 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 SNX19Q92543 992 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 NCLNQ969V3 563 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 TRIM54Q9BYV2 358 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 GPATCH2LQ9NWQ4 482 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 IRAK4Q9NWZ3 460 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 L3MBTL1Q9Y468 752 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 E2F8A0AVK6 867 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 MEFVO15553 781 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 ZNF189O75820 626 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 PTPRAP18433 802 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 BMP6P22004 513 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 KDSRQ06136 332 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 ACTN3Q08043 901 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 TWF1Q12792 350 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 RABGAP1LQ5R372 815 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 C10orf120Q5SQS8 335 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 TTC30AQ86WT1 665 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 GIPC2Q8TF65 315 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 KRT35Q92764 455 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 HAS1Q92839 578 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 ZBTB45Q96K62 511 aaPredicted RBP10.5□□□□□ -0.73
GGA3-201ENST00000537686 PPP1R36Q96LQ0 422 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 TSSK1BQ9BXA7 367 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 FUT8Q9BYC5 575 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 NPHS2Q9NP85 383 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 L1RE1Q9UN81 338 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 SLC30A1Q9Y6M5 507 aa10.5□□□□□ -0.73
GGA3-201ENST00000537686 C4BP0C0L5 1744 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 TISP43B9A030 160 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 AP3B1O00203 1094 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 PDHXO00330 501 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 CYB561D2O14569 222 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 MEIS2O14770 477 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 SPAG6O75602 509 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 PROSCO94903 275 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 POLBP06746 335 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 RAP1GAPP47736 663 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 CTCFP49711 727 aaPredicted RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 ALDH5A1P51649 535 aaPredicted RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 MAPRE1Q15691 268 aaKnown RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 THEMIS2Q5TEJ8 643 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 AGBL2Q5U5Z8 902 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 WDR93Q6P2C0 686 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 RFX8Q6ZV50 586 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 LRRC6Q86X45 466 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 WDR49Q8IV35 697 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 PPIL6Q8IXY8 311 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 CCDC33Q8N5R6 958 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 ZNF473Q8WTR7 871 aaKnown RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 BHMTQ93088 406 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 ARL8AQ96BM9 186 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 CDCA5Q96FF9 252 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 TMEM169Q96HH4 297 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 DDX50Q9BQ39 737 aaKnown RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 ROPN1BQ9BZX4 212 aaPredicted RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 ROPN1Q9HAT0 212 aaPredicted RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 C20orf96Q9NUD7 363 aaPredicted RBP10.49□□□□□ -0.73
GGA3-201ENST00000537686 ARHGEF38Q9NXL2 777 aa10.49□□□□□ -0.73
GGA3-201ENST00000537686 MTSS1O43312 755 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms