RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 MYLPFQ96A32 169 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 MRPL38Q96DV4 380 aaKnown RBP25.74■■□□□ 1.71
HMGA2-208ENST00000537429 HNRNPABQ99729 332 aaKnown RBP25.74■■□□□ 1.71
HMGA2-208ENST00000537429 B3GNT5Q9BYG0 378 aa25.74■■□□□ 1.71
HMGA2-208ENST00000537429 ABLIM3O94929 683 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 SKILP12757 684 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 KLHL30Q0D2K2 578 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 STILQ15468 1287 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 CCDC186Q7Z3E2 898 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 ZNF677Q86XU0 584 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 SLC2A14Q8TDB8 520 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 PANX2Q96RD6 677 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 HAUS4Q9H6D7 363 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 ZNHIT6Q9NWK9 470 aaKnown RBP25.73■■□□□ 1.71
HMGA2-208ENST00000537429 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.73■■□□□ 1.71
HMGA2-208ENST00000537429 BZW2Q9Y6E2 419 aaKnown RBP25.73■■□□□ 1.71
HMGA2-208ENST00000537429 MTMR11A4FU01 709 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 CLDN5O00501 218 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 MED7O43513 233 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 SERPING1P05155 500 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 ADH1AP07327 375 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 CDR1P51861 262 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 CYP27A1Q02318 531 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 TPGS2Q68CL5 300 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 LCLAT1Q6UWP7 414 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 C4orf50Q6ZRC1 276 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 PGLYRP2Q96PD5 576 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 SYT11Q9BT88 431 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 TSPAN16Q9UKR8 245 aa25.73■■□□□ 1.71
HMGA2-208ENST00000537429 VNN2O95498 520 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 CFAP221Q4G0U5 840 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 SPATA2LQ8IUW3 424 aaPredicted RBP25.72■■□□□ 1.71
HMGA2-208ENST00000537429 C2orf15Q8WU43 125 aaKnown RBP25.72■■□□□ 1.71
HMGA2-208ENST00000537429 SLC20A1Q8WUM9 679 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 FUBP3Q96I24 572 aaKnown RBP eCLIP25.72■■□□□ 1.715e-9■■■□□ 16.9
HMGA2-208ENST00000537429 ARHGAP20Q9P2F6 1191 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 AFF4Q9UHB7 1163 aaKnown RBP25.72■■□□□ 1.71
HMGA2-208ENST00000537429 PCDHGC3Q9UN70 934 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 PCDHB5Q9Y5E4 795 aa25.72■■□□□ 1.71
HMGA2-208ENST00000537429 MMEP08473 750 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 CFHP08603 1231 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 ATF2P15336 505 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 CHRNB2P17787 502 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 KLRC2P26717 231 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 CDK17Q00537 523 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 CDR2Q01850 454 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 TAF3Q5VWG9 929 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 LILRA6Q6PI73 481 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 ZNF571Q7Z3V5 609 aaPredicted RBP25.71■■□□□ 1.71
HMGA2-208ENST00000537429 FAM35AQ86V20 835 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 PALB2Q86YC2 1186 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 ATAD1Q8NBU5 361 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 SPPL2BQ8TCT7 592 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 ZNF518BQ9C0D4 1074 aa25.71■■□□□ 1.71
HMGA2-208ENST00000537429 MICAL2O94851 1124 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 FECHP22830 423 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ADORA2BP29275 332 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 SSTR3P32745 418 aaPredicted RBP25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ADCY1Q08828 1119 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 CCDC173Q0VFZ6 552 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 TDRD12Q587J7 1177 aaKnown RBP25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ADGRD2Q7Z7M1 963 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ANKRD52Q8NB46 1076 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 PPP1R9BQ96SB3 815 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 CHP1Q99653 195 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 AGPAT1Q99943 283 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 MED10Q9BTT4 135 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ABCB6Q9NP58 842 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 ABI2Q9NYB9 513 aaPredicted RBP25.7■■□□□ 1.7
HMGA2-208ENST00000537429 LMCD1Q9NZU5 365 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 PTPRDP23468 1912 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 MYO7AQ13402 2215 aa25.7■■□□□ 1.7
HMGA2-208ENST00000537429 TGM5O43548 720 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 C1RP00736 705 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 PLEKP08567 350 aaPredicted RBP25.69■■□□□ 1.7
HMGA2-208ENST00000537429 BDNFP23560 247 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 FMO1Q01740 532 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 GOLGA7BQ2TAP0 167 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 PKDCCQ504Y2 493 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 RBM23Q86U06 439 aaKnown RBP25.69■■□□□ 1.7
HMGA2-208ENST00000537429 TTC30AQ86WT1 665 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 OLIG1Q8TAK6 271 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 RHOBTB2Q9BYZ6 727 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 CRISPLD1Q9H336 500 aa25.69■■□□□ 1.7
HMGA2-208ENST00000537429 CLASP2O75122 1294 aaKnown RBP25.68■■□□□ 1.7
HMGA2-208ENST00000537429 IGFBP4P22692 258 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 CLCN4P51793 760 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 DUSP4Q13115 394 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 GPR153Q6NV75 609 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 PPP2R3CQ969Q6 453 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 SMARCD1Q96GM5 515 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 HSFX1Q9UBD0 423 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 HESX1Q9UBX0 185 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 MAFFQ9ULX9 164 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 ATP8B3O60423 1300 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 SSU72P8A0A1W2PR75 194 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 PER2O15055 1255 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 CYP2F1P24903 491 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 MAGEA11P43364 429 aa25.68■■□□□ 1.7
HMGA2-208ENST00000537429 MAPK8IP2Q13387 824 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms