RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KLRG1Q96E93 195 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 PAIP1Q9H074 479 aaKnown RBP11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 TRABDQ9H4I3 376 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 PCYOX1Q9UHG3 505 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 NAGPAQ9UK23 515 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 UNCXA6NJT0 531 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 NOTOA8MTQ0 251 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 TCEA3O75764 348 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 AQP4P55087 323 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 CENPPQ6IPU0 288 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 POTEHQ6S545 545 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 OTOAQ7RTW8 1153 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 SLC26A7Q8TE54 656 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 JADE3Q92613 823 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 CCDC127Q96BQ5 260 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 SPATA17Q96L03 361 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 S100A14Q9HCY8 104 aa11.38□□□□□ -0.59
CLSTN3-207ENST00000537408 RARBP10826 455 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 FCER1AP12319 257 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ERFP50548 548 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 VCPP55072 806 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CDK16Q00536 496 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SP3Q02447 781 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 LETM2Q2VYF4 491 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 RWDD4Q6NW29 188 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 UGT2A3Q6UWM9 527 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CENPUQ71F23 418 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CABP7Q86V35 215 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ZNF713Q8N859 430 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CATSPER1Q8NEC5 780 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 KIAA1522Q9P206 1035 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 FBXO40Q9UH90 709 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 MAD1L1Q9Y6D9 718 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 NID2Q14112 1375 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ZMYM2Q9UBW7 1377 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 MIF4GDA9UHW6 222 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 TMEM114B3SHH9 223 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CYP2D6P10635 497 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 WDR4P57081 412 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ESRRGP62508 458 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 PTK2Q05397 1052 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 DLG1Q12959 904 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ATP1A4Q13733 1029 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 HIC1Q14526 733 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CNGA3Q16281 694 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 AHI1Q8N157 1196 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 C7orf25Q9BPX7 421 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 TRIM9Q9C026 710 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CEP44Q9C0F1 390 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SEMA6BQ9H3T3 888 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 EPS15L1Q9UBC2 864 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 POTECB2RU33 542 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 KLRF2D3W0D1 207 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 ADAM23O75077 832 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 TM7SF2O76062 418 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 PARNO95453 639 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 TFAP2AP05549 437 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 FAM58BPP0C7Q3 252 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SLC5A2P31639 672 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 PHKA2P46019 1235 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 COBLL1Q53SF7 1204 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 SFT2D3Q587I9 215 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 EARS2Q5JPH6 523 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 MTMR14Q8NCE2 650 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 UNKQ9C0B0 810 aaKnown RBP11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 VTA1Q9NP79 307 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 WHRNQ9P202 907 aa11.37□□□□□ -0.59
CLSTN3-207ENST00000537408 GOLGA8CPA6NN73 597 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 FOXP2O15409 715 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 TIMM44O43615 452 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 ENTPD1P49961 510 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 PPIL2Q13356 520 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 ULK2Q8IYT8 1036 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 GUF1Q8N442 669 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 PLVAPQ9BX97 442 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 NUMBLQ9Y6R0 609 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 EXOC1LA0A1B0GW35 172 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 SMIM18P0DKX4 95 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 FDX1P10109 184 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 ITIH2P19823 946 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 PTGIRP43119 386 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 GSSP48637 474 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 CDK9P50750 372 aaKnown RBP11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 PPP4CP60510 307 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 TGFBIQ15582 683 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 FAM160B2Q86V87 743 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 ZNF75CPQ92670 426 aaPredicted RBP11.36□□□□□ -0.59
CLSTN3-207ENST00000537408 WNK4Q96J92 1243 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms