RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 SHISA7A6NL88 538 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 PRR5-ARHGAP8B1AHC4 643 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 EIF3DO15371 548 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC170-202ENST00000537358 CUTAO60888 179 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 PRAMEF12O95522 483 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 YEATS4O95619 227 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 CNR2P34972 360 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 SOX9P48436 509 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 PDE6CP51160 858 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 ARHGAP8P85298 464 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 SATB1Q01826 763 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 LMNB2Q03252 620 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 GRSF1Q12849 480 aaKnown RBP eCLIP10.54□□□□□ -0.72
CCDC170-202ENST00000537358 PON2Q15165 354 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 LAIR1Q6GTX8 287 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 HS2ST1Q7LGA3 356 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 HSCBQ8IWL3 235 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 DHX58Q96C10 678 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 RMDN1Q96DB5 314 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 HPDLQ96IR7 371 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 SLC46A2Q9BY10 475 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 BACH2Q9BYV9 841 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 IL21Q9HBE4 155 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 TDP1Q9NUW8 608 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 FAM13BQ9NYF5 915 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 HSPBP1Q9NZL4 362 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 EHD2Q9NZN4 543 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 GTF3C4Q9UKN8 822 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 CDV3Q9UKY7 258 aaKnown RBP10.54□□□□□ -0.72
CCDC170-202ENST00000537358 NCANO14594 1321 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 UBE4BO95155 1302 aa10.54□□□□□ -0.72
CCDC170-202ENST00000537358 A0A087X0B3 334 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TRAV19A0A0A6YYK7 116 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ATG13O75143 517 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CLSTN1O94985 981 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 PAPSS2O95340 614 aaPredicted RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 F11P03951 625 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 USP17L7P0C7H9 530 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TNNI1P19237 187 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ACAT1P24752 427 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CYP2F1P24903 491 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ANXA13P27216 316 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 SNRPFP62306 86 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TNK2Q07912 1038 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 RUNX3Q13761 415 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 SIM2Q14190 667 aaPredicted RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ZNF268Q14587 947 aaPredicted RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 PDGFRLQ15198 375 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CFAP221Q4G0U5 840 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 FAM26FQ5R3K3 315 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TXNDC8Q6A555 127 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CEP68Q76N32 757 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 MON1AQ86VX9 555 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 LONP2Q86WA8 852 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 WDR49Q8IV35 697 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 SCN4BQ8IWT1 228 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 ZSWIM2Q8NEG5 633 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TRMT2BQ96GJ1 504 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 MMS19Q96T76 1030 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TRIM9Q9C026 710 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TRPC7Q9HCX4 862 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 GKN1Q9NS71 199 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 RBM12Q9NTZ6 932 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TMLHEQ9NVH6 421 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 KBTBD4Q9NVX7 518 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 TFIP11Q9UBB9 837 aaKnown RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
CCDC170-202ENST00000537358 CDH9Q9ULB4 789 aa10.53□□□□□ -0.72
CCDC170-202ENST00000537358 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 FOXD2O60548 495 aaPredicted RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 LRP3O75074 770 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 NOL4O94818 638 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 CKMP06732 381 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 DLATP10515 647 aaKnown RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 TDGF1P13385 188 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 GRIK1P39086 918 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 MAGEA11P43364 429 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 IFNAR2P48551 515 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 WNT7BP56706 349 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 TNNC1P63316 161 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 FAM160A1Q05DH4 1040 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 NR1H3Q13133 447 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 TRPC3Q13507 836 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 KCNB1Q14721 858 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 SNRNP35Q16560 246 aaKnown RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 DDR2Q16832 855 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 RSPO4Q2I0M5 234 aaPredicted RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 SOWAHAQ2M3V2 549 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 HEATR6Q6AI08 1181 aaKnown RBP10.52□□□□□ -0.73
CCDC170-202ENST00000537358 ATL3Q6DD88 541 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 TXNDC11Q6PKC3 985 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 CPA6Q8N4T0 437 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 TTC16Q8NEE8 873 aa10.52□□□□□ -0.73
CCDC170-202ENST00000537358 CCDC26Q8TAB7 109 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms