RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 KRT28Q7Z3Y7 464 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 SIAH1Q8IUQ4 282 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 CYP2W1Q8TAV3 490 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 POC1BQ8TC44 478 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 BPIFB1Q8TDL5 484 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 TMEM125Q96AQ2 219 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 TEPSINQ96N21 525 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 TEX101Q9BY14 249 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 PCDHAC1Q9H158 963 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 CTTNBP2NLQ9P2B4 639 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 GRHPRQ9UBQ7 328 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 MRPS17Q9Y2R5 130 aaKnown RBP6.37□□□□□ -1.39
PRKDC-208ENST00000536710 NEU2Q9Y3R4 380 aa6.37□□□□□ -1.39
PRKDC-208ENST00000536710 A0A087WZ62 844 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 AQP7P3A6NL99 342 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 F5H697 171 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ACKR2O00590 384 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 TRIM38O00635 465 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 NPC1O15118 1278 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 RRP9O43818 475 aaKnown RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 SRGAP2O75044 1071 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 SOAT2O75908 522 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ATICP31939 592 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ANXA11P50995 505 aaKnown RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 PRKG1Q13976 671 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ICAM4Q14773 271 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 NPY5RQ15761 445 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 SPDYE7PQ495Y7 208 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 CD300EQ496F6 205 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ARHGAP15Q53QZ3 475 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ARHGAP40Q5TG30 622 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 CACNA2D3Q8IZS8 1091 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 SPARTQ8N0X7 666 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 RNF31Q96EP0 1072 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 GDF15Q99988 308 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 SSBP3Q9BWW4 388 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 MAGEH1Q9H213 219 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 DHX36Q9H2U1 1008 aaKnown RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 ZMYND8Q9ULU4 1186 aaPredicted RBP6.36□□□□□ -1.39
PRKDC-208ENST00000536710 CDY1Q9Y6F8 540 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 FPGT-TNNI3KV9GXZ4 949 aa6.36□□□□□ -1.39
PRKDC-208ENST00000536710 TRIM24O15164 1050 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 COQ9O75208 318 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 FGAP02671 866 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 CCT5P48643 541 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 NDUFV1P49821 464 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 MYO1EQ12965 1108 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 ZIK1Q3SY52 487 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-208ENST00000536710 FAXCQ5TGI0 409 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF585AQ6P3V2 769 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 USP17L6PQ6QN14 398 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 STYXQ8WUJ0 223 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 SNX19Q92543 992 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 LOXL4Q96JB6 756 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 PRPF18Q99633 342 aaKnown RBP6.35□□□□□ -1.39
PRKDC-208ENST00000536710 PTDSS2Q9BVG9 487 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
PRKDC-208ENST00000536710 SLC46A2Q9BY10 475 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 NECTIN3Q9NQS3 549 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 IGSF9Q9P2J2 1179 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 KCNE5Q9UJ90 142 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 MAP3K2Q9Y2U5 619 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.35□□□□□ -1.39
PRKDC-208ENST00000536710 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 CHST2Q9Y4C5 530 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 NOX1Q9Y5S8 564 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
PRKDC-208ENST00000536710 PRAMEF33A0A0G2JMD5 474 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 E7ENX8 843 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 SYT5O00445 386 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 SH3BP5O60239 455 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 PRAMEF10O60809 474 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 FAM20BO75063 409 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 HLA-DOAP06340 250 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ELANEP08246 267 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 CD6P30203 668 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 NPTX2P47972 431 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 DGKEP52429 567 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 RPS7P62081 194 aaKnown RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 CXADRP78310 365 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 TAP2Q03519 686 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 DYRK1AQ13627 763 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 E2F2Q14209 437 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 MAPKAPK3Q16644 382 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ZNF750Q32MQ0 723 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 RBM20Q5T481 1227 aaKnown RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ARL6IP4Q66PJ3 421 aaKnown RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 RAP1GAP2Q684P5 730 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 RGS7BPQ6MZT1 257 aaPredicted RBP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 CCDC28AQ8IWP9 274 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 SLC15A3Q8IY34 581 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ADGRG5Q8IZF4 528 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 TMEM132CQ8N3T6 1108 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRKDC-208ENST00000536710 PAF1Q8N7H5 531 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 DNAJB14Q8TBM8 379 aa6.34□□□□□ -1.39
PRKDC-208ENST00000536710 FAM71BQ8TC56 605 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms