RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PSMG2Q969U7 264 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TCEAL4Q96EI5 215 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FUBP3Q96I24 572 aaKnown RBP eCLIP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYADMQ96S97 322 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CORO1BQ9BR76 489 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF518BQ9C0D4 1074 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ELOVL4Q9GZR5 314 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF334Q9HCZ1 680 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FANCLQ9NW38 375 aa12.06□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MOSPD3O75425 235 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CCDC130P13994 396 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF18P17022 549 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PTPN2P17706 415 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 BDNFP23560 247 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FSHRP23945 695 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MAGEA11P43364 429 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ALDH1A3P47895 512 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TUFMP49411 452 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 EPHB3P54753 998 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 EPHA5P54756 1037 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYL5Q02045 173 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CYP27A1Q02318 531 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 APBA1Q02410 837 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MTMR3Q13615 1198 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MAPRE1Q15691 268 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 DDR2Q16832 855 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PHLDB3Q6NSJ2 640 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 DPY19L2P1Q6NXN4 242 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 C4orf50Q6ZRC1 276 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GET4Q7L5D6 327 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 DHX40Q8IX18 779 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FUKQ8N0W3 1084 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GJD3Q8N144 294 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 C12orf29Q8N999 325 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 EHBP1Q8NDI1 1231 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GIPC2Q8TF65 315 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ING5Q8WYH8 240 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TNIP3Q96KP6 325 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZNF512Q96ME7 567 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NT5C1BQ96P26 610 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CRACR2AQ9BSW2 395 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 INTS2Q9H0H0 1204 aaKnown RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NDST4Q9H3R1 872 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CISHQ9NSE2 258 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAM49BQ9NUQ9 324 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GCNT4Q9P109 453 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MAGEC2Q9UBF1 373 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 USTQ9Y2C2 406 aa12.05□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYO16Q9Y6X6 1858 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LETM1O95202 739 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 HMGA1P17096 107 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GJA1P17302 382 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CEBPBP17676 345 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SLC9A1P19634 815 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ACO1P21399 889 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RAD23BP54727 409 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PLD1Q13393 1074 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KRT31Q15323 416 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SKOR2Q2VWA4 1001 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ZSCAN23Q3MJ62 389 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 IQCEQ6IPM2 695 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GJB7Q6PEY0 223 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TRIM65Q6PJ69 517 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GAREM2Q75VX8 874 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 DNAJB7Q7Z6W7 309 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 FAM35AQ86V20 835 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NPAS3Q8IXF0 933 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 ELMOD1Q8N336 334 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TDRD5Q8NAT2 981 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 SLC4A11Q8NBS3 891 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KREMEN1Q96MU8 473 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NT5C1AQ9BXI3 368 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 IL21Q9HBE4 155 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TAB2Q9NYJ8 693 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 AJAP1Q9UKB5 411 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 NR2E1Q9Y466 385 aa12.04□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 F8VP50 259 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 BEST1O76090 585 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 MYL4P12829 197 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 LAMP2P13473 410 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 EEF1GP26641 437 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PON1P27169 355 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 KCNMA1Q12791 1236 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 CETN1Q12798 172 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 VSTM1Q6UX27 236 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
TNFRSF1A-208ENST00000536194 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms