RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DTX3Q8N9I9 347 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 SPATA5Q8NB90 893 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 PJA1Q8NG27 643 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 AFG1LQ8WV93 481 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 APBB2Q92870 758 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 MAP4K1Q92918 833 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 KAZALD1Q96I82 304 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 SHDQ96IW2 340 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 FERD3LQ96RJ6 166 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 NUP88Q99567 741 aaPredicted RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 TTPALQ9BTX7 342 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 ACAD9Q9H845 621 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 RXFP3Q9NSD7 469 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 HMG20BQ9P0W2 317 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 DLGAP2Q9P1A6 1054 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 IGSF9Q9P2J2 1179 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 HDAC6Q9UBN7 1215 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 OAZ3Q9UMX2 235 aa4.66□□□□□ -1.66
YBX3-205ENST00000536107 COA3Q9Y2R0 106 aaPredicted RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 PDS5AQ29RF7 1337 aaKnown RBP4.66□□□□□ -1.66
YBX3-205ENST00000536107 COL4A3Q01955 1670 aa4.65□□□□□ -1.66
YBX3-205ENST00000536107 NKRFO15226 690 aaKnown RBP eCLIP4.65□□□□□ -1.67
YBX3-205ENST00000536107 CR2P20023 1033 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 CASTP20810 708 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 LIMK1P53667 647 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 UBE3AQ05086 875 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 SIM2Q14190 667 aaPredicted RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 USP10Q14694 798 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 SF3A2Q15428 464 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 GNPTABQ3T906 1256 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 RABL6Q3YEC7 729 aaPredicted RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 STEAP3Q658P3 488 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 CCDC149Q6ZUS6 474 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 CHST3Q7LGC8 479 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 SESTD1Q86VW0 696 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 PROSER1Q86XN7 944 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 THNSL1Q8IYQ7 743 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 ANKRD44Q8N8A2 993 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 TSR2Q969E8 191 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 TMEM169Q96HH4 297 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 CTAGE1Q96RT6 745 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 TCF25Q9BQ70 676 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 A1CFQ9NQ94 594 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 TMEM260Q9NX78 707 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 PUF60Q9UHX1 559 aaKnown RBP4.65□□□□□ -1.67
YBX3-205ENST00000536107 SLC12A7Q9Y666 1083 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 ITPR1Q14643 2758 aa4.65□□□□□ -1.67
YBX3-205ENST00000536107 TET1Q8NFU7 2136 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 CNOT1A5YKK6 2376 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 TMEM191CA6NGB0 347 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 ATP2A1O14983 1001 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 TXNP10599 105 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 EEF2P13639 858 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 ITGB6P18564 788 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 IL15P40933 162 aaPredicted RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 TROAPQ12815 778 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 DUSP8Q13202 625 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 PTPN14Q15678 1187 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 KIAA0753Q2KHM9 967 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 TRIM71Q2Q1W2 868 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 VASNQ6EMK4 673 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 KIAA1841Q6NSI8 718 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 NSMFQ6X4W1 530 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 ADGRA1Q86SQ6 560 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 CMTR2Q8IYT2 770 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 LRRC47Q8N1G4 583 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 ZNF808Q8N4W9 903 aaPredicted RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 MIGA1Q8NAN2 632 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 RSAD2Q8WXG1 361 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 MPHOSPH6Q99547 160 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 FAM126AQ9BYI3 521 aaPredicted RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 SLC2A4RGQ9NR83 387 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 RNF146Q9NTX7 359 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 CEP72Q9P209 647 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 ADD3Q9UEY8 706 aaKnown RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 COL11A1P12107 1806 aaPredicted RBP4.64□□□□□ -1.67
YBX3-205ENST00000536107 IGSF10Q6WRI0 2623 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 PTPN13Q12923 2485 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 MYH2Q9UKX2 1941 aa4.64□□□□□ -1.67
YBX3-205ENST00000536107 TEP1Q99973 2627 aaKnown RBP4.63□□□□□ -1.67
YBX3-205ENST00000536107 TENM4Q6N022 2769 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 KANSL1LA0AUZ9 987 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 HIDE1A8MVS5 230 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 ENPP3O14638 875 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 DGKIO75912 1065 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 FGF18O76093 207 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 FBXO21O94952 628 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 PEX11BO96011 259 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 ERBB2P04626 1255 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 ZNF888P0CJ79 500 aaPredicted RBP4.63□□□□□ -1.67
YBX3-205ENST00000536107 ALAS1P13196 640 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 AKR1B1P15121 316 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 BCL6P41182 706 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 OAZ1P54368 228 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 SRSF1Q07955 248 aaKnown RBP eCLIP4.63□□□□□ -1.67
YBX3-205ENST00000536107 IKQ13123 557 aaPredicted RBP4.63□□□□□ -1.67
YBX3-205ENST00000536107 WDR43Q15061 677 aaKnown RBP eCLIP4.63□□□□□ -1.67
YBX3-205ENST00000536107 ZKSCAN2Q63HK3 967 aa4.63□□□□□ -1.67
YBX3-205ENST00000536107 SLC44A3Q8N4M1 653 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms