RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 GLIS3Q8NEA6 775 aa22.11■■□□□ 1.13
LTBR-205ENST00000535739 HPS3Q969F9 1004 aa22.11■■□□□ 1.13
LTBR-205ENST00000535739 INTS4Q96HW7 963 aaKnown RBP22.11■■□□□ 1.13
LTBR-205ENST00000535739 ABCB6Q9NP58 842 aa22.11■■□□□ 1.13
LTBR-205ENST00000535739 CDV3Q9UKY7 258 aaKnown RBP22.11■■□□□ 1.13
LTBR-205ENST00000535739 PTPRJQ12913 1337 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 TADA3O75528 432 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 RETP07949 1114 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 ARSAP15289 507 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 SDHBP21912 280 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 RPL10AP62906 217 aaKnown RBP22.1■■□□□ 1.13
LTBR-205ENST00000535739 SOWAHAQ2M3V2 549 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 PKN3Q6P5Z2 889 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 ADGRF2Q8IZF7 708 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 TOP6BLQ8N6T0 577 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 OR5B17Q8NGF7 314 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 CHFRQ96EP1 664 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 ZSCAN16Q9H4T2 348 aaPredicted RBP22.1■■□□□ 1.13
LTBR-205ENST00000535739 KIF9Q9HAQ2 790 aa22.1■■□□□ 1.13
LTBR-205ENST00000535739 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.1■■□□□ 1.13
LTBR-205ENST00000535739 GABRDO14764 452 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 NOL4O94818 638 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 CNR2P34972 360 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 LHX1P48742 406 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 NASPP49321 788 aaPredicted RBP22.09■■□□□ 1.13
LTBR-205ENST00000535739 STK38Q15208 465 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 FSTL4Q6MZW2 842 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 SPATA2LQ8IUW3 424 aaPredicted RBP22.09■■□□□ 1.13
LTBR-205ENST00000535739 ANKRD36BP1Q96IX9 119 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 INTS13Q9NVM9 706 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 UXTQ9UBK9 157 aaPredicted RBP22.09■■□□□ 1.13
LTBR-205ENST00000535739 PTPRDP23468 1912 aa22.09■■□□□ 1.13
LTBR-205ENST00000535739 EML5Q05BV3 1969 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 TPRP12270 2363 aaKnown RBP22.08■■□□□ 1.13
LTBR-205ENST00000535739 SOBPA7XYQ1 873 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 STX6O43752 255 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 TMEM196Q5HYL7 178 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 CC2D1AQ6P1N0 951 aaPredicted RBP22.08■■□□□ 1.13
LTBR-205ENST00000535739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.08■■□□□ 1.13
LTBR-205ENST00000535739 CBWD2Q8IUF1 395 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 SCN4BQ8IWT1 228 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 LINC00301Q8NCQ3 95 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 SPATA18Q8TC71 538 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 TRMT2BQ96GJ1 504 aaKnown RBP22.08■■□□□ 1.13
LTBR-205ENST00000535739 MYRFLQ96LU7 910 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 SLC22A12Q96S37 553 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 CYP2S1Q96SQ9 504 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 TRPC7Q9HCX4 862 aa22.08■■□□□ 1.13
LTBR-205ENST00000535739 DCDC2BA2VCK2 349 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 ZNF233A6NK53 670 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 TRDMT1O14717 391 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 KIAA0391O15091 583 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 ATP2C2O75185 946 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 LMO2P25791 158 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 PCSK1P29120 753 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 HOXA6P31267 233 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 HOXD13P35453 343 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 GRSF1Q12849 480 aaKnown RBP eCLIP22.07■■□□□ 1.12
LTBR-205ENST00000535739 MYO1EQ12965 1108 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 ZNF268Q14587 947 aaPredicted RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 CFAP221Q4G0U5 840 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 FAM171BQ6P995 826 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 CEP68Q76N32 757 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 WDR5BQ86VZ2 330 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 TTC16Q8NEE8 873 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 HPDLQ96IR7 371 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 TNMDQ9H2S6 317 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 FBRSL1Q9HCM7 1045 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 TFIP11Q9UBB9 837 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 R3HCC1Q9Y3T6 440 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 HELZP42694 1942 aaKnown RBP22.07■■□□□ 1.12
LTBR-205ENST00000535739 MYO16Q9Y6X6 1858 aa22.07■■□□□ 1.12
LTBR-205ENST00000535739 SPTLC2O15270 562 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 LRP3O75074 770 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 EGFP01133 1207 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 TNNC2P02585 160 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 PXNP49023 591 aaPredicted RBP22.06■■□□□ 1.12
LTBR-205ENST00000535739 PSMC1P62191 440 aaKnown RBP22.06■■□□□ 1.12
LTBR-205ENST00000535739 E2F4Q16254 413 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 NAIF1Q69YI7 327 aaPredicted RBP22.06■■□□□ 1.12
LTBR-205ENST00000535739 STXBP4Q6ZWJ1 553 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 LIMS2Q7Z4I7 341 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 FAM160A2Q8N612 972 aaPredicted RBP22.06■■□□□ 1.12
LTBR-205ENST00000535739 KBTBD7Q8WVZ9 684 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 FUBP3Q96I24 572 aaKnown RBP eCLIP22.06■■□□□ 1.12
LTBR-205ENST00000535739 RTKNQ9BST9 563 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 SEMA4GQ9NTN9 838 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 KBTBD4Q9NVX7 518 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 HSPBP1Q9NZL4 362 aa22.06■■□□□ 1.12
LTBR-205ENST00000535739 GALK1P51570 392 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 FAM160A1Q05DH4 1040 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 MTF1Q14872 753 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 PDGFRLQ15198 375 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 SURF1Q15526 300 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 DUOXA2Q1HG44 320 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 DPH6Q7L8W6 267 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 SYT15Q9BQS2 421 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 TRIM9Q9C026 710 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 LRRC27Q9C0I9 530 aa22.05■■□□□ 1.12
LTBR-205ENST00000535739 CRTAC1Q9NQ79 661 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms