RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 COL4A2P08572 1712 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 CHRNB1P11230 501 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 SOX9P48436 509 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 CCR3P51677 355 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 CUL4BQ13620 913 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 PSMD6Q15008 389 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 MAPRE1Q15691 268 aaKnown RBP17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 CFAP221Q4G0U5 840 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 TSSK4Q6SA08 328 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 MAMSTRQ6ZN01 415 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 C4orf50Q6ZRC1 276 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 TRAPPC11Q7Z392 1133 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 TMEM150AQ86TG1 271 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 FANCMQ8IYD8 2048 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 TTC8Q8TAM2 541 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 NUP210Q8TEM1 1887 aaPredicted RBP17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 RUBCNQ92622 972 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 MMS19Q96T76 1030 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 SYT15Q9BQS2 421 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 GTSE1Q9NYZ3 720 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 CDH9Q9ULB4 789 aa17.34■□□□□ 0.37
CLSTN3-204ENST00000535313 OTOGLQ3ZCN5 2332 aa17.33■□□□□ 0.37
CLSTN3-204ENST00000535313 MYBPHLA2RUH7 354 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 HCRTO43612 131 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 NOL4O94818 638 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 SLFN14P0C7P3 912 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 CTHP32929 405 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 NRLP54845 237 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 CYP24A1Q07973 514 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 BMT2Q1RMZ1 405 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 TXNDC8Q6A555 127 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 FAM171BQ6P995 826 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 LIMS2Q7Z4I7 341 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 MON1AQ86VX9 555 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 SCN4BQ8IWT1 228 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 ZBTB44Q8NCP5 570 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 STKLD1Q8NE28 680 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 GOLGA5Q8TBA6 731 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 KBTBD7Q8WVZ9 684 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 KIF9Q9HAQ2 790 aa17.33■□□□□ 0.36
CLSTN3-204ENST00000535313 GPR179Q6PRD1 2367 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 FRYLO94915 3013 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 EXOC3O60645 756 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 PDGFRBP09619 1106 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 WARSP23381 471 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 LMO2P25791 158 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 MAGEA11P43364 429 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 TNNC1P63316 161 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 TNK2Q07912 1038 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 TRPC3Q13507 836 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 ITPRIPL2Q3MIP1 535 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 DGKKQ5KSL6 1271 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 CC2D1AQ6P1N0 951 aaPredicted RBP17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 C12orf56Q8IXR9 622 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 SUMF1Q8NBK3 374 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 NELL1Q92832 810 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 TRMT2BQ96GJ1 504 aaKnown RBP17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 MYRFLQ96LU7 910 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 SNX25Q9H3E2 840 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 TDP1Q9NUW8 608 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 MAGEC2Q9UBF1 373 aaPredicted RBP17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 SERTAD1Q9UHV2 236 aa17.32■□□□□ 0.36
CLSTN3-204ENST00000535313 ATP2C2O75185 946 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 GNL1P36915 607 aaPredicted RBP17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 CXCL12P48061 93 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 PSMC1P62191 440 aaKnown RBP17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 CCDC142Q17RM4 750 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 TXNDC11Q6PKC3 985 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 VSTM1Q6UX27 236 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 SPEM1Q8N4L4 309 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 FSIP1Q8NA03 581 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 USP13Q92995 863 aaPredicted RBP17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 MYLPFQ96A32 169 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 TRPC7Q9HCX4 862 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 EXOC1Q9NV70 894 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 CCL26Q9Y258 94 aa17.31■□□□□ 0.36
CLSTN3-204ENST00000535313 TRAV19A0A0A6YYK7 116 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 LILRB5O75023 590 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 PHACTR2O75167 634 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 CST3P01034 146 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 FAM163BP0C2L3 166 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 ANXA13P27216 316 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 GRIK1P39086 918 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 CYP27A1Q02318 531 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 ZNF268Q14587 947 aaPredicted RBP17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 PON2Q15165 354 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 WDR72Q3MJ13 1102 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 KIAA2013Q8IYS2 634 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 OR6B3Q8NGW1 331 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 SECISBP2LQ93073 1101 aaKnown RBP17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 CEP295NLQ96MC4 621 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 FAM83CQ9BQN1 747 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 CRTAC1Q9NQ79 661 aa17.3■□□□□ 0.36
CLSTN3-204ENST00000535313 RBM12Q9NTZ6 932 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms