RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DDX28Q9NUL7 540 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 CDY2AQ9Y6F7 541 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 CDY1Q9Y6F8 540 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 SPATA31A1Q5TZJ5 1347 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 PPP1R37O75864 691 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ICAM1P05362 532 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 YY1P25490 414 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 FDFT1P37268 417 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 BLOC1S5Q8TDH9 187 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ZCCHC11Q5TAX3 1644 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 DEAF1O75398 565 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 NCKAP1LP55160 1127 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 CUL2Q13617 745 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 FAM83EQ2M2I3 478 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 KLHDC7AQ5VTJ3 777 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 DTX3LQ8TDB6 740 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 FBXO32Q969P5 355 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 MAN1C1Q9NR34 630 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 UBE2Q2LH0YL09 131 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ACO1P21399 889 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 PSMA3P25788 255 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 MKRN4PQ13434 485 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 RASGRP2Q7LDG7 609 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 KLF6Q99612 283 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 IL1RL2Q9HB29 575 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ATP11BQ9Y2G3 1177 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 ALG6Q9Y672 507 aa18.89■□□□□ 0.61
SFSWAP-203ENST00000535236 RNASEH1O60930 286 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 B3GAT3O94766 335 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 S100A5P33763 92 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 ATXN3P54252 364 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 CD302Q8IX05 232 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 MTO1Q9Y2Z2 717 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 USP15Q9Y4E8 981 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 GPR75-ASB3A0A0A6YYF3 556 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 A0A1W2PQJ5 194 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 F8W810 466 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 CYP11B2P19099 503 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 PAN2Q504Q3 1202 aaKnown RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 KRT78Q8N1N4 520 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 ZKSCAN4Q969J2 545 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 EPB41L4AQ9HCS5 686 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 NMRK1Q9NWW6 199 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 EPN3Q9H201 632 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 PRR23D1E9PI22 279 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 ADCY3O60266 1144 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 PRR23D2P0DMB1 279 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 TCN1P20061 433 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 CCDC157Q569K6 752 aa18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-203ENST00000535236 BFSP2Q13515 415 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 NR1I3Q14994 352 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 TRIM60Q495X7 471 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 MRNIPQ6NTE8 343 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 SETD3Q86TU7 594 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 AGGF1Q8N302 714 aaeCLIP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 FRMD8Q9BZ67 464 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 IPPQ9Y573 584 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 BTKQ06187 659 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 RUNX1T1Q06455 604 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 CHST12Q9NRB3 414 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 USP42Q9H9J4 1324 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 CLEC16AQ2KHT3 1053 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 MROH9Q5TGP6 573 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 JADE3Q92613 823 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 THAP11Q96EK4 314 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 TSEN34Q9BSV6 310 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 ROPN1BQ9BZX4 212 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 ROPN1Q9HAT0 212 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 RBM12Q9NTZ6 932 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 FXR1P51114 621 aaKnown RBP eCLIP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 CNTN1Q12860 1018 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 MTM1Q13496 603 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 KYNUQ16719 465 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 LRRC36Q1X8D7 754 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 LVRNQ6Q4G3 990 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 MIB1Q86YT6 1006 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 CARNMT1Q8N4J0 409 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 C10orf53Q8N6V4 93 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 E2F7Q96AV8 911 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 CCDC134Q9H6E4 229 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 PNMA8BQ9ULN7 279 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 RASSF10A6NK89 507 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 TRPC5OSA6NMA1 111 aa18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 RIBC1Q8N443 379 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 IRX2Q9BZI1 471 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 EXOSC4Q9NPD3 245 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 EIF3LQ9Y262 564 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-203ENST00000535236 OGTO15294 1046 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 URODP06132 367 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 VCLP18206 1134 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 PRIM2P49643 509 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 AGBL2Q5U5Z8 902 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 ACAD10Q6JQN1 1059 aa18.86■□□□□ 0.61
SFSWAP-203ENST00000535236 THTPAQ9BU02 230 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms