RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TBCA	O75347	108 aa	Known RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	KRT18	P05783	430 aa	Known RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	PLCG1	P19174	1290 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	GJB2	P29033	226 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	AVPR1A	P37288	418 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	CYP4F8	P98187	520 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	DHX8	Q14562	1220 aa	Known RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	TAF12	Q16514	161 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	NFE2	Q16621	373 aa	Predicted RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	SV2C	Q496J9	727 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	HEATR6	Q6AI08	1181 aa	Known RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	FSTL4	Q6MZW2	842 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	CEP68	Q76N32	757 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	CACNA2D4	Q7Z3S7	1137 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	MON1A	Q86VX9	555 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	SPATA18	Q8TC71	538 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	GIPC2	Q8TF65	315 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	LEO1	Q8WVC0	666 aa	Predicted RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	LARP4B	Q92615	738 aa	Known RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	USP13	Q92995	863 aa	Predicted RBP	12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	CHFR	Q96EP1	664 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	MYRFL	Q96LU7	910 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	ACBD6	Q9BR61	282 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	OCEL1	Q9H607	264 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	ABCB6	Q9NP58	842 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	HPS4	Q9NQG7	708 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	SMC3	Q9UQE7	1217 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	PCDHB5	Q9Y5E4	795 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	PCDHGA5	Q9Y5G8	931 aa		12.43	□□□□□ -0.42
CTNND1-238	ENST00000534647	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	OTOL1	A6NHN0	477 aa	Predicted RBP	12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	GDF9	O60383	454 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	CSH1	P0DML2	217 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	CSH2	P0DML3	217 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	DRD1	P21728	446 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	ADSS	P30520	456 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	KARS	Q15046	597 aa	Known RBP	12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	PDGFRL	Q15198	375 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	FBXO43	Q4G163	708 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	PLA2G2C	Q5R387	149 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	BRAP	Q7Z569	592 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	MAB21L3	Q8N8X9	362 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	EXOC4	Q96A65	974 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	TRMT2B	Q96GJ1	504 aa	Known RBP	12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZNF560	Q96MR9	790 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	GBP4	Q96PP9	640 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	UXT	Q9UBK9	157 aa	Predicted RBP	12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	SEL1L	Q9UBV2	794 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	CCL26	Q9Y258	94 aa		12.42	□□□□□ -0.42
CTNND1-238	ENST00000534647	SOWAHD	A6NJG2	315 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	TISP43	B9A030	160 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	RPP40	O75818	363 aa	Known RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	KRT37	O76014	449 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	EPN2	O95208	641 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	RPL10A	P62906	217 aa	Known RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	TSPY1	Q01534	308 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	BFSP1	Q12934	665 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	CC2D1A	Q6P1N0	951 aa	Predicted RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	PKN3	Q6P5Z2	889 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	EFCAB13	Q8IY85	973 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMEM86A	Q8N2M4	240 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	LRRC52	Q8N7C0	313 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	CXorf38	Q8TB03	319 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	STK32A	Q8WU08	396 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	MRPS31	Q92665	395 aa	Known RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	SPATA32	Q96LK8	384 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	PKMYT1	Q99640	499 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	SMG9	Q9H0W8	520 aa	Known RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	ZHX3	Q9H4I2	956 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	EBF3	Q9H4W6	596 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMLHE	Q9NVH6	421 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	GDAP2	Q9NXN4	497 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	ABI2	Q9NYB9	513 aa	Predicted RBP	12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	STK17A	Q9UEE5	414 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	SLC8A2	Q9UPR5	921 aa		12.41	□□□□□ -0.42
CTNND1-238	ENST00000534647	TSC2	P49815	1807 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	RCCD1	A6NED2	376 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	NOL4	O94818	638 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	LDHA	P00338	332 aa	Known RBP	12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	GAP43	P17677	238 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	VAMP1	P23763	118 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	HOXC13	P31276	330 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	GALK1	P51570	392 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	GRIN1	Q05586	938 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	CFAP221	Q4G0U5	840 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	LARP1B	Q659C4	914 aa	Known RBP	12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	TXNDC8	Q6A555	127 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	PDCL2	Q8N4E4	241 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	CACTIN	Q8WUQ7	758 aa	Known RBP	12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	POMGNT1	Q8WZA1	660 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	P2RY13	Q9BPV8	354 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	ARRDC1-AS1	Q9H2J1	176 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	TMEM206	Q9H813	350 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	FBRSL1	Q9HCM7	1045 aa	Known RBP	12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	EBF1	Q9UH73	591 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	EXOC7	Q9UPT5	735 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	CHD8	Q9HCK8	2581 aa		12.4	□□□□□ -0.42
CTNND1-238	ENST00000534647	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms