RNA–Protein interactions for RNA: ENST00000534555.5

RPS3-220, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 387 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-220ENST00000534555 ZNF77Q15935 545 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 EML3Q32P44 896 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 DEFB124Q8NES8 71 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 GATA6Q92908 595 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 ACDQ96AP0 544 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 CDK5RAP3Q96JB5 506 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 IKZF4Q9H2S9 585 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 LINC00597Q9H2U6 94 aa17.09■□□□□ 0.33
RPS3-220ENST00000534555 SRRM3A6NNA2 597 aaPredicted RBP17.08■□□□□ 0.32
RPS3-220ENST00000534555 KPNA7A9QM74 516 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 TRAK2O60296 914 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 FAM13AO94988 1023 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 CEACAM1P13688 526 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 CSRP1P21291 193 aaKnown RBP17.08■□□□□ 0.32
RPS3-220ENST00000534555 CYP2F1P24903 491 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.32
RPS3-220ENST00000534555 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 USP39Q53GS9 565 aaKnown RBP17.08■□□□□ 0.32
RPS3-220ENST00000534555 C2orf27AQ580R0 203 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 ADALQ6DHV7 355 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 KIAA1211LQ6NV74 962 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 GPBP1Q86WP2 473 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 EXOC4Q96A65 974 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 FIZ1Q96SL8 496 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 ZHX3Q9H4I2 956 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 ASB7Q9H672 318 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 ODF2LQ9ULJ1 636 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
RPS3-220ENST00000534555 SOBPA7XYQ1 873 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 TULP1O00294 542 aaPredicted RBP17.07■□□□□ 0.32
RPS3-220ENST00000534555 ACAT1P24752 427 aaKnown RBP17.07■□□□□ 0.32
RPS3-220ENST00000534555 DHPSP49366 369 aaPredicted RBP17.07■□□□□ 0.32
RPS3-220ENST00000534555 USP4Q13107 963 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 CCDC142Q17RM4 750 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
RPS3-220ENST00000534555 ANO7Q6IWH7 933 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 CYP2U1Q7Z449 544 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 CCDC33Q8N5R6 958 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 KCTD17Q8N5Z5 321 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 ARL14EPQ8N8R7 260 aaPredicted RBP17.07■□□□□ 0.32
RPS3-220ENST00000534555 USP33Q8TEY7 942 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 PIGKQ92643 395 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 ATP2A3Q93084 1043 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 CCSER1Q9C0I3 900 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 PARVGQ9HBI0 331 aa17.07■□□□□ 0.32
RPS3-220ENST00000534555 BAHCC1Q9P281 2608 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 FAM208BQ5VWN6 2430 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 K7EQS6 105 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 NOL4O94818 638 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 CKMP06732 381 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 USP17L7P0C7H9 530 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 OPRD1P41143 372 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 ZNF131P52739 623 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 GTF2BQ00403 316 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 TSPY1Q01534 308 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 MCM6Q14566 821 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 SV2CQ496J9 727 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 CRELD2Q6UXH1 353 aaPredicted RBP17.06■□□□□ 0.32
RPS3-220ENST00000534555 RASSF3Q86WH2 238 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 PDCL2Q8N4E4 241 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 MDGA1Q8NFP4 955 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 RLN3Q8WXF3 142 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 GCNT4Q9P109 453 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
RPS3-220ENST00000534555 GTF3C4Q9UKN8 822 aa17.06■□□□□ 0.32
RPS3-220ENST00000534555 AGO2Q9UKV8 859 aaKnown RBP17.06■□□□□ 0.32
RPS3-220ENST00000534555 TRAV19A0A0A6YYK7 116 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 C2orf78A6NCI8 922 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 HCRTO43612 131 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 HYAL3O43820 417 aaPredicted RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 HNRNPLP14866 589 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPS3-220ENST00000534555 WNT7BP56706 349 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 NR1H3Q13133 447 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 NFE2Q16621 373 aaPredicted RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 TMEM92Q6UXU6 159 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 FRMD1Q8N878 549 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 ZCCHC14Q8WYQ9 949 aaKnown RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 TRMT2BQ96GJ1 504 aaKnown RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 FAM84AQ96KN4 292 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 CNOT6LQ96LI5 555 aaKnown RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 TMEM206Q9H813 350 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 BLOC1S4Q9NUP1 217 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 DDX43Q9NXZ2 648 aaKnown RBP17.05■□□□□ 0.32
RPS3-220ENST00000534555 L1RE1Q9UN81 338 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 LAMA1P25391 3075 aa17.05■□□□□ 0.32
RPS3-220ENST00000534555 TMEM8BA6NDV4 472 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 KRT18P05783 430 aaKnown RBP17.04■□□□□ 0.32
RPS3-220ENST00000534555 RPL10AP62906 217 aaKnown RBP17.04■□□□□ 0.32
RPS3-220ENST00000534555 ZXDBP98169 803 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 GAB4Q2WGN9 574 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 INTS6LQ5JSJ4 861 aaKnown RBP17.04■□□□□ 0.32
RPS3-220ENST00000534555 ARMCX6Q7L4S7 300 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 C11orf74Q86VG3 221 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
RPS3-220ENST00000534555 SFTPA1Q8IWL2 248 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms