RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	SYN2	Q92777	582 aa	Predicted RBP	16.4	■□□□□ 0.22
NCAPD3-213	ENST00000534532	ZNF518B	Q9C0D4	1074 aa		16.4	■□□□□ 0.22
NCAPD3-213	ENST00000534532	SYNPO2	Q9UMS6	1093 aa		16.4	■□□□□ 0.22
NCAPD3-213	ENST00000534532	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	16.4	■□□□□ 0.22
NCAPD3-213	ENST00000534532	MTA1	Q13330	715 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	AARS2	Q5JTZ9	985 aa	Known RBP	16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	UNC45B	Q8IWX7	931 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TMEM199	Q8N511	208 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SPATA4	Q8NEY3	305 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	GOLPH3	Q9H4A6	298 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FBXO44	Q9H4M3	255 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SNX12	Q9UMY4	172 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SPATA31D1	Q6ZQQ2	1576 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SPAG7	O75391	227 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	GUCY2C	P25092	1073 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FRMD8	Q9BZ67	464 aa	Predicted RBP	16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PPCS	Q9HAB8	311 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	KIF17	Q9P2E2	1029 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NEU2	Q9Y3R4	380 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZMYM2	Q9UBW7	1377 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CCDC22	O60826	627 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	KRT72	Q14CN4	511 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	KAZALD1	Q96I82	304 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MRI	Q9BWK5	157 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SNTG2	Q9NY99	539 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	DCTN4	Q9UJW0	460 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SLC15A5	A6NIM6	579 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	RHOBTB1	O94844	696 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MDH1B	Q5I0G3	518 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SLC30A10	Q6XR72	485 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FBXL21	Q9UKT6	434 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZDHHC9	Q9Y397	364 aa		16.39	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TARSL2	A2RTX5	802 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SUPT3H	B4E1H0	165 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CTDNEP1	O95476	244 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PPP2R2A	P63151	447 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CENPC	Q03188	943 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FAM171A1	Q5VUB5	890 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CHP1	Q99653	195 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	H2AFY	O75367	372 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PMPCB	O75439	489 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MAP3K7CL	P57077	242 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	GEMIN4	P57678	1058 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	GIT2	Q14161	759 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SEC23A	Q15436	765 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ADGRA1	Q86SQ6	560 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SYT15	Q9BQS2	421 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TINF2	Q9BSI4	451 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	APOL5	Q9BWW9	433 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	INTU	Q9ULD6	942 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	LMNA	P02545	664 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FDFT1	P37268	417 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	DDX43	Q9NXZ2	648 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FBXL5	Q9UKA1	691 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ALG6	Q9Y672	507 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	FAM47DP	A6NHR8	397 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PPM1L	Q5SGD2	360 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TGS1	Q96RS0	853 aa	Known RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CBWD1	Q9BRT8	395 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TASP1	Q9H6P5	420 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PREX1	Q8TCU6	1659 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ADCYAP1R1	P41586	468 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZNF200	P98182	395 aa	Predicted RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MRNIP	Q6NTE8	343 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SLFN11	Q7Z7L1	901 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	RIOX2	Q8IUF8	465 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NR1H4	Q96RI1	486 aa	Predicted RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MLXIPL	Q9NP71	852 aa		16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	UXT	Q9UBK9	157 aa	Predicted RBP	16.38	■□□□□ 0.21
NCAPD3-213	ENST00000534532	KIDINS220	Q9ULH0	1771 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	STIP1	P31948	543 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	RHOA	P61586	193 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PHKG1	Q16816	387 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SKA1	Q96BD8	255 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	AAR2	Q9Y312	384 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ANGPT2	O15123	496 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SETSIP	P0DME0	302 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	BST2	Q10589	180 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	NR1I3	Q14994	352 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ATMIN	O43313	823 aa	Predicted RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CXCL8	P10145	99 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	MYBPC2	Q14324	1141 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	PDK2	Q15119	407 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ZNF720	Q7Z2F6	126 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TMEM176A	Q96HP8	235 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	XPO6	Q96QU8	1125 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	WWP1	Q9H0M0	922 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TRABD	Q9H4I3	376 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	XAB2	Q9HCS7	855 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SCUBE2	Q9NQ36	999 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	TUFM	P49411	452 aa	Known RBP	16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	AGR3	Q8TD06	166 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	BLOC1S5	Q8TDH9	187 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SMYD3	Q9H7B4	428 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	SPACA6	W5XKT8	324 aa		16.37	■□□□□ 0.21
NCAPD3-213	ENST00000534532	ATXN3	P54252	364 aa	Predicted RBP	16.36	■□□□□ 0.21
NCAPD3-213	ENST00000534532	CYP24A1	Q07973	514 aa		16.36	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms