RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	TOMM22	Q9NS69	142 aa		6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	IGSF5	Q9NSI5	407 aa		6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	MAP3K20	Q9NYL2	800 aa	Known RBP	6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	FBXL7	Q9UJT9	491 aa		6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	MRPL11	Q9Y3B7	192 aa	Known RBP	6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	DUSP10	Q9Y6W6	482 aa		6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	KMT2E	Q8IZD2	1858 aa		6.98	□□□□□ -1.29
PICALM-223	ENST00000534412	ATG2A	Q2TAZ0	1938 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412		A0A1W2PQU0	124 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	CYP7B1	O75881	506 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	GLP2R	O95838	553 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	GNAT1	P11488	350 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	ATF7	P17544	494 aa	Predicted RBP	6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	MX1	P20591	662 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	DNAJB1	P25685	340 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	ICAM3	P32942	547 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	NDUFV1	P49821	464 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	RRP1	P56182	461 aa	Known RBP	6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	MGAT3	Q09327	533 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	PGM5	Q15124	567 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	DDR2	Q16832	855 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	ASPRV1	Q53RT3	343 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	SLC35F1	Q5T1Q4	408 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	MCTP2	Q6DN12	878 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	USP53	Q70EK8	1073 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	ADGRD2	Q7Z7M1	963 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	LGI4	Q8N135	537 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	SAMD3	Q8N6K7	520 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	IL31RA	Q8NI17	732 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	PHOSPHO1	Q8TCT1	267 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	LMBR1	Q8WVP7	490 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	SUSD6	Q92537	303 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	CLIC6	Q96NY7	704 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	PHF7	Q9BWX1	381 aa	Predicted RBP	6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	KRTAP4-2	Q9BYR5	136 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	JMJD4	Q9H9V9	463 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	GPR27	Q9NS67	375 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	DTL	Q9NZJ0	730 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	USP15	Q9Y4E8	981 aa	Predicted RBP	6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	KIAA1217	Q5T5P2	1943 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	NEDD4	P46934	1319 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	FRMPD4	Q14CM0	1322 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	GVINP1	Q7Z2Y8	2422 aa		6.97	□□□□□ -1.29
PICALM-223	ENST00000534412	NLRC5	Q86WI3	1866 aa		6.96	□□□□□ -1.29
PICALM-223	ENST00000534412		A0A0D9SFI3	127 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MROH6	A6NGR9	719 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	DDX3X	O00571	662 aa	Known RBP eCLIP	6.96	□□□□□ -1.3	6e-40	■■□□□ 12.9
PICALM-223	ENST00000534412	CFB	P00751	764 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	CHRNA1	P02708	482 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	ITGB1	P05556	798 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	GHR	P10912	638 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	AVPR2	P30518	371 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	NBL1	P41271	181 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	GRIA2	P42262	883 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	EFEMP1	Q12805	493 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	BTG3	Q14201	252 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	LPIN1	Q14693	890 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	PTPN21	Q16825	1174 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	CR1L	Q2VPA4	569 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	EMC4	Q5J8M3	183 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	C20orf194	Q5TEA3	1177 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	DENND5A	Q6IQ26	1287 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	TAF2	Q6P1X5	1199 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	METTL7B	Q6UX53	244 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MFSD6	Q6ZSS7	791 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	ZNF589	Q86UQ0	364 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	CMTR2	Q8IYT2	770 aa	Known RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	SPPL3	Q8TCT6	385 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	ATP8B4	Q8TF62	1192 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	ESR2	Q92731	530 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	EVI5L	Q96CN4	794 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MTMR8	Q96EF0	704 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	C1orf159	Q96HA4	380 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	SGSM3	Q96HU1	749 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	INPP4A	Q96PE3	977 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	GPR20	Q99678	358 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	AMN	Q9BXJ7	453 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	KRTAP9-3	Q9BYQ3	159 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	KRTAP4-11	Q9BYQ6	195 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	SMOC1	Q9H4F8	434 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	RNF41	Q9H4P4	317 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MLXIP	Q9HAP2	919 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	SETD4	Q9NVD3	440 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MYOT	Q9UBF9	498 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	ZNF215	Q9UL58	517 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	BARX2	Q9UMQ3	279 aa	Predicted RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	NPFFR2	Q9Y5X5	522 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MRPL42	Q9Y6G3	142 aa	Known RBP	6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	DMXL1	Q9Y485	3027 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	NRCAM	Q92823	1304 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	MYO7A	Q13402	2215 aa		6.96	□□□□□ -1.3
PICALM-223	ENST00000534412	TCRBV5S2	A0A599	114 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	FSD2	A1L4K1	749 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	MBLAC1	A4D2B0	266 aa	Predicted RBP	6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	PRR23A	A6NEV1	266 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	ENPP3	O14638	875 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	TADA3	O75528	432 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	STAM2	O75886	525 aa		6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	CYP1A1	P04798	512 aa	Predicted RBP	6.95	□□□□□ -1.3
PICALM-223	ENST00000534412	NRIP1	P48552	1158 aa		6.95	□□□□□ -1.3

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