RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 ENTPD2Q9Y5L3 495 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 CFAP69A5D8W1 941 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 TBX3O15119 743 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 FRS3O43559 492 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 MARCH6O60337 910 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 C1QL1O75973 258 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 URI1O94763 535 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 NR2F6P10588 404 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 CYP2C9P11712 490 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 XRCC6P12956 609 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 ELLP55199 621 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 SLC13A2Q13183 592 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 GBX1Q14549 363 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 GRM3Q14832 879 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 ARHGAP40Q5TG30 622 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 APOA5Q6Q788 366 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 CHST15Q7LFX5 561 aaPredicted RBP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 RD3Q7Z3Z2 195 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 SRGAP1Q7Z6B7 1085 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 DTX2Q86UW9 622 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 BOLLQ8N9W6 283 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 UROC1Q96N76 676 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 PUS7Q96PZ0 661 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 MESP1Q9BRJ9 268 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 SMURF2Q9HAU4 748 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 SERTAD3Q9UJW9 196 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 USP19O94966 1318 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 SPATA31A6Q5VVP1 1343 aa4.93□□□□□ -1.62
ATPAF1-211ENST00000534216 TBC1D4O60343 1298 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ZBED1O96006 694 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 IGLV2-14P01704 120 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 HRGP04196 525 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ZFXP17010 805 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 PCSK6P29122 969 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 LRPAP1P30533 357 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 CACNB3P54284 484 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 SP2Q02086 613 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 EIF2B5Q13144 721 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 BMPR2Q13873 1038 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ZNF618Q5T7W0 954 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 TEDDM1Q5T9Z0 273 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 RGS7BPQ6MZT1 257 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 MAVSQ7Z434 540 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ARHGEF25Q86VW2 580 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 GAS2L3Q86XJ1 694 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ZNF280BQ86YH2 543 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 FMNL3Q8IVF7 1028 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ATRIPQ8WXE1 791 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 MAML1Q92585 1016 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 SUCLG2Q96I99 432 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 TIMP4Q99727 224 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ASB6Q9NWX5 421 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 OBP2AQ9NY56 170 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 STK32BQ9NY57 414 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 TPCN1Q9ULQ1 816 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ST3GAL5Q9UNP4 418 aa4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 ARHGEF17Q96PE2 2063 aaPredicted RBP4.92□□□□□ -1.62
ATPAF1-211ENST00000534216 KAT6AQ92794 2004 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ISM1B1AKI9 464 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 TMEM233B4DJY2 109 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 hCG_1984214I3L0E3 225 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 TPP1O14773 563 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 SLC16A3O15427 465 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 TLR5O60602 858 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 NXPH3O95157 252 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 TTLL1O95922 423 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ATF3P18847 181 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 WT1P19544 449 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ITPKBP27987 946 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 SATB1Q01826 763 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 MYO1EQ12965 1108 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 RAB32Q13637 225 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 E2F2Q14209 437 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ZIK1Q3SY52 487 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 PLAC9Q5JTB6 97 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 AKNAD1Q5T1N1 836 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 TSTD2Q5T7W7 516 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 CCDC149Q6ZUS6 474 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 WDR75Q8IWA0 830 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 MPP5Q8N3R9 675 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 FAM156AQ8NDB6 213 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ATG4AQ8WYN0 398 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 LRTOMTQ8WZ04 291 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 HAPLN3Q96S86 360 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 ZNF518BQ9C0D4 1074 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 MS4A7Q9GZW8 240 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 CXorf36Q9H7Y0 433 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 CPNE5Q9HCH3 593 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 PRDM11Q9NQV5 511 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 SERTAD4Q9NUC0 356 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 CPNE7Q9UBL6 633 aa4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 MRPS17Q9Y2R5 130 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 FRMPD2Q68DX3 1309 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-211ENST00000534216 LRRC3CA6NJW4 275 aa4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 GCOM1H8Y6P7 765 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-211ENST00000534216 CSF1RP07333 972 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms