RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ABCD1P33897 745 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 PPP3CAQ08209 521 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 WDR72Q3MJ13 1102 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 MDH1BQ5I0G3 518 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 PKN3Q6P5Z2 889 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 RTL10Q7L3V2 364 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 NT5DC4Q86YG4 428 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 SCN4BQ8IWT1 228 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 C12orf56Q8IXR9 622 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 THEM5Q8N1Q8 247 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 ELMOD1Q8N336 334 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 TOP6BLQ8N6T0 577 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 USP13Q92995 863 aaPredicted RBP10.32□□□□□ -0.76
SSBP3-215ENST00000533946 WBP2Q969T9 261 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 PCED1BQ96HM7 432 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 TWNKQ96RR1 684 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 MMS19Q96T76 1030 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 ACBD6Q9BR61 282 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 TRMT61BQ9BVS5 477 aaKnown RBP10.32□□□□□ -0.76
SSBP3-215ENST00000533946 ZNF518BQ9C0D4 1074 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 LRRC27Q9C0I9 530 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 BRD9Q9H8M2 597 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 MAGEF1Q9HAY2 307 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 TRPV4Q9HBA0 871 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 FBRSL1Q9HCM7 1045 aaKnown RBP10.32□□□□□ -0.76
SSBP3-215ENST00000533946 LTB4R2Q9NPC1 389 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 DSEQ9UL01 958 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 SIT1Q9Y3P8 196 aa10.32□□□□□ -0.76
SSBP3-215ENST00000533946 FANCMQ8IYD8 2048 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 FAM186AA6NE01 2351 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 A0A1W2PQ27 194 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 A0A1W2PQ64 194 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 A0A1W2PQD8 194 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 ZNF197O14709 1029 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 BEST1O76090 585 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 MICAL2O94851 1124 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 RHOBTB3O94955 611 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 CD44P16070 742 aaKnown RBP10.31□□□□□ -0.76
SSBP3-215ENST00000533946 PSMC3P17980 439 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 BMP6P22004 513 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 WARSP23381 471 aaKnown RBP10.31□□□□□ -0.76
SSBP3-215ENST00000533946 CCNE1P24864 410 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 PNPLA4P41247 253 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 CLDN10P78369 228 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 DMWDQ09019 674 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 ZCWPW2Q504Y3 356 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 Q6ZS52 159 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 MFSD6LQ8IWD5 586 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 TTC16Q8NEE8 873 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 SEMA4DQ92854 862 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 MMRN2Q9H8L6 949 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 HPS4Q9NQG7 708 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 MAFFQ9ULX9 164 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 UBE4BO95155 1302 aa10.31□□□□□ -0.76
SSBP3-215ENST00000533946 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 F8VP50 259 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 SP9P0CG40 484 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 CCDC130P13994 396 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 PTPN1P18031 435 aaKnown RBP10.3□□□□□ -0.76
SSBP3-215ENST00000533946 GNL1P36915 607 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-215ENST00000533946 PRCPP42785 496 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 GCLMP48507 274 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 TUFMP49411 452 aaKnown RBP10.3□□□□□ -0.76
SSBP3-215ENST00000533946 TSPY1Q01534 308 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 CYP27A1Q02318 531 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 MESP2Q0VG99 397 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 MTAPQ13126 283 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 STXBP4Q6ZWJ1 553 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 SV2AQ7L0J3 742 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 HS2ST1Q7LGA3 356 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 SFTPA1Q8IWL2 248 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 DCP1BQ8IZD4 617 aaKnown RBP10.3□□□□□ -0.76
SSBP3-215ENST00000533946 C12orf29Q8N999 325 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 OR6B3Q8NGW1 331 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 SCAMP5Q8TAC9 235 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 SPPL2BQ8TCT7 592 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 TAS1R2Q8TE23 839 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 EZH1Q92800 747 aaPredicted RBP10.3□□□□□ -0.76
SSBP3-215ENST00000533946 FNBP1Q96RU3 617 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 RNF38Q9H0F5 515 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 KCNH6Q9H252 994 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 LINC00597Q9H2U6 94 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 TASP1Q9H6P5 420 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 PIAS3Q9Y6X2 628 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 OTOGLQ3ZCN5 2332 aa10.3□□□□□ -0.76
SSBP3-215ENST00000533946 PRR23AA6NEV1 266 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 PDXKO00764 312 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 KIAA0391O15091 583 aaKnown RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 NOL4O94818 638 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 CALCAP01258 141 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 HLA-DRAP01903 254 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 NBL1P41271 181 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 LHX1P48742 406 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 MYL7Q01449 175 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 FCHO2Q0JRZ9 810 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 IFRD2Q12894 506 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 BIRC3Q13489 604 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms