RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 POTEB3A0JP26 581 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 KRT8P05787 483 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FAM153BP0C7A2 387 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 OSBPP22059 807 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SERPINB1P30740 379 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 GP5P40197 560 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ARSEP51690 589 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NPY5RQ15761 445 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FAM153CQ494X1 144 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CERKLQ49MI3 558 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 LVRNQ6Q4G3 990 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 POTEBQ6S5H4 581 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF720Q7Z2F6 126 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZDHHC17Q8IUH5 632 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ABRAQ8N0Z2 381 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PPM1NQ8N819 430 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FEZF2Q8TBJ5 459 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CNBD2Q96M20 576 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MRPL1Q9BYD6 325 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 MRM3Q9HC36 420 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RCOR3Q9P2K3 495 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 FAM153AQ9UHL3 310 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 USTQ9Y2C2 406 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 VPS4BO75351 444 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SRP72O76094 671 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 FKBP9O95302 570 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NTSR2O95665 410 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NTRK1P04629 796 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ITGA2BP08514 1039 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MYL3P08590 195 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RBP1P09455 135 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PROZP22891 400 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 GIT2Q14161 759 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FLOT2Q14254 428 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TRIM16LQ309B1 348 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DARS2Q6PI48 645 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZPBP2Q6X784 338 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PRR23BQ6ZRT6 265 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF554Q86TJ5 538 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 HORMAD1Q86X24 394 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MAP4K3Q8IVH8 894 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FAM71AQ8IYT1 594 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DYDC2Q96IM9 177 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 REEP2Q9BRK0 252 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF577Q9BSK1 485 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ILKAPQ9H0C8 392 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 PLEKHA5Q9HAU0 1116 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 HMG20AQ9NP66 347 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 GALNT8Q9NY28 637 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TRIM10Q9UDY6 481 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CNTNAP4Q9C0A0 1308 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ZNF263O14978 683 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FAM189A1O60320 539 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 SNAP91O60641 907 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 AKAP3O75969 853 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CFBP00751 764 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RARAP10276 462 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PSMC3P17980 439 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PAMP19021 973 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 C4BPBP20851 252 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 FGFR4P22455 802 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 GPS1Q13098 491 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MTA1Q13330 715 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TUBA3CQ13748 450 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PDK1Q15118 436 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 ABCB5Q2M3G0 1257 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TIMM50Q3ZCQ8 353 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NKX2-3Q8TAU0 364 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 EPS8L1Q8TE68 723 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 LPAR1Q92633 364 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CRAMP1Q96RY5 1269 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CEP44Q9C0F1 390 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 UTP6Q9NYH9 597 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 MPP6Q9NZW5 540 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PCDHA10Q9Y5I2 948 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 IGSF9BQ9UPX0 1349 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 hCG_1642624A0A1W2PR95 340 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 EML1O00423 815 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 XPO1O14980 1071 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 CLDN3O15551 220 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DAB1O75553 588 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 PDHA1P08559 390 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 HOXC6P09630 235 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 TPBGLP0DKB5 382 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CASP1P29466 404 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 RXRGP48443 463 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 VASPP50552 380 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 LRRC14Q15048 493 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 OR6Y1Q8NGX8 325 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 LENG1Q96BZ8 264 aaPredicted RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 PRPF18Q99633 342 aaKnown RBP4.22□□□□□ -1.73
SOX6-217ENST00000533870 ECSITQ9BQ95 431 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 CAAP1Q9H8G2 361 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DMAC2Q9NW81 257 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 HSPBP1Q9NZL4 362 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 DKK3Q9UBP4 350 aa4.22□□□□□ -1.73
SOX6-217ENST00000533870 MINPP1Q9UNW1 487 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms