RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PEAR1Q5VY43 1037 aaPredicted RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 CC2D1AQ6P1N0 951 aaPredicted RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 MON1AQ86VX9 555 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 CPA6Q8N4T0 437 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 MDM1Q8TC05 714 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 OSCP1Q8WVF1 389 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 CYP2S1Q96SQ9 504 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 KIF9Q9HAQ2 790 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 KMT5AQ9NQR1 393 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 DUS2Q9NX74 493 aaKnown RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 PILRBQ9UKJ0 227 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 MMP17Q9ULZ9 603 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 NAV2Q8IVL1 2488 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 E9PMD0 336 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 TOM1L1O75674 476 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 CYP3A5P20815 502 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 CCT6AP40227 531 aaKnown RBP13.31□□□□□ -0.28
SVIP-205ENST00000533774 MCL1Q07820 350 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 USP4Q13107 963 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
SVIP-205ENST00000533774 MAP7D1Q3KQU3 841 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
SVIP-205ENST00000533774 LPCAT2Q7L5N7 544 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 PNPLA1Q8N8W4 532 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 CRELD1Q96HD1 420 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 GTPBP2Q9BX10 602 aaKnown RBP13.31□□□□□ -0.28
SVIP-205ENST00000533774 TM6SF1Q9BZW5 370 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 CACNA2D2Q9NY47 1150 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 UBQLN1Q9UMX0 589 aaKnown RBP13.31□□□□□ -0.28
SVIP-205ENST00000533774 KIAA1024Q9UPX6 916 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 RAXQ9Y2V3 346 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 KALRNO60229 2985 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 TENM4Q6N022 2769 aa13.31□□□□□ -0.28
SVIP-205ENST00000533774 KNL1Q8NG31 2342 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 FAM189A1O60320 539 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 PRB1P04280 392 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 CYP11A1P05108 521 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 CFIP05156 583 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 ODC1P11926 461 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 DDX6P26196 483 aaKnown RBP eCLIP13.3□□□□□ -0.28
SVIP-205ENST00000533774 ZNF174Q15697 407 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 ENOX2Q16206 610 aaKnown RBP13.3□□□□□ -0.28
SVIP-205ENST00000533774 TAF12Q16514 161 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 ZNF423Q2M1K9 1284 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 CCNI2Q6ZMN8 369 aaPredicted RBP13.3□□□□□ -0.28
SVIP-205ENST00000533774 EFCAB13Q8IY85 973 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 DEFB119Q8N690 84 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 TTC16Q8NEE8 873 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 ERMNQ8TAM6 284 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
SVIP-205ENST00000533774 PLEKHA5Q9HAU0 1116 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 CAPN10Q9HC96 672 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 BRMS1Q9HCU9 246 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 ZDHHC4Q9NPG8 344 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 DDX19AQ9NUU7 478 aaKnown RBP13.3□□□□□ -0.28
SVIP-205ENST00000533774 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
SVIP-205ENST00000533774 MAGED2Q9UNF1 606 aaPredicted RBP13.3□□□□□ -0.28
SVIP-205ENST00000533774 SGK1O00141 431 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 CLTAP09496 248 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 OR52Z1P0C646 297 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 MUTP22033 750 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 ZXDBP98169 803 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 EMC10Q5UCC4 262 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 SPATA1Q5VX52 437 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 C9orf57Q5W0N0 161 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 KCNK18Q7Z418 384 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 MINDY1Q8N5J2 469 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 TMEM161BQ8NDZ6 487 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 ADAMTS14Q8WXS8 1223 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 ATP2A3Q93084 1043 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 NTPCRQ9BSD7 190 aaKnown RBP13.29□□□□□ -0.28
SVIP-205ENST00000533774 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
SVIP-205ENST00000533774 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
SVIP-205ENST00000533774 SLC6A14Q9UN76 642 aa13.29□□□□□ -0.28
SVIP-205ENST00000533774 RBM19Q9Y4C8 960 aaKnown RBP13.29□□□□□ -0.28
SVIP-205ENST00000533774 CABIN1Q9Y6J0 2220 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 PIRO00625 290 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 CLDN3O15551 220 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 SH3BP5O60239 455 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 OPHN1O60890 802 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 GJB3O75712 270 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 ADRB2P07550 413 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 FTH1P19P0C7X4 201 aa13.28□□□□□ -0.28
SVIP-205ENST00000533774 MAPTP10636 758 aaKnown RBP13.28□□□□□ -0.28
SVIP-205ENST00000533774 SLC6A11P48066 632 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms