RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 SNX9Q9Y5X1 595 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 COL4A6Q14031 1691 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CASTOR2A6NHX0 329 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 USP27XA6NNY8 438 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PJA2O43164 708 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 THAP12O43422 761 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 TACC1O75410 805 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 B3GAT3O94766 335 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 GALTP07902 379 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PPM1AP35813 382 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 NSFP46459 744 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 OR1G1P47890 313 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 CLCNKBP51801 687 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF132P52740 706 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SOX4Q06945 474 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 INCA1Q0VD86 236 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 UPP1Q16831 310 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 DCLRE1AQ6PJP8 1040 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SPATA18Q8TC71 538 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 SAMD11Q96NU1 681 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 COLEC11Q9BWP8 271 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PLVAPQ9BX97 442 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 NT5C1AQ9BXI3 368 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF518BQ9C0D4 1074 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 MIS12Q9H081 205 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 GUCA1BQ9UMX6 200 aa11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 PDCD11Q14690 1871 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-218ENST00000533761 LAMA3Q16787 3333 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 A0A0A6YYK5 440 aaPredicted RBP11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 ANKRD62A6NC57 917 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 PODXLO00592 558 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 NRP1O14786 923 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 RTN2O75298 545 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 CILPO75339 1184 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 WEE2P0C1S8 567 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 MYBL1P10243 752 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 BMPR1AP36894 532 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 SNX16P57768 344 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 GNG11P61952 73 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 NOP9Q86U38 636 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 RHOT2Q8IXI1 618 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM86AQ8N2M4 240 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 UBR7Q8N806 425 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC30A5Q8TAD4 765 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 TIFAQ96CG3 184 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 TNIP3Q96KP6 325 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 MRGPRX2Q96LB1 330 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 TGS1Q96RS0 853 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 SYT11Q9BT88 431 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 SNX25Q9H3E2 840 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 GOLGA2P5Q9HBQ8 144 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 DSEQ9UL01 958 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 YBX2Q9Y2T7 364 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 TRIOBPQ9H2D6 2365 aa11.61□□□□□ -0.55
CCDC90B-218ENST00000533761 DDX3XO00571 662 aaKnown RBP eCLIP11.6□□□□□ -0.552e-15■■■■■ 36.8
CCDC90B-218ENST00000533761 TRAPPC3O43617 180 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 B4GALT3O60512 393 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TADA2AO75478 443 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 RB1P06400 928 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM253P0C7T8 217 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 VDRP11473 427 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 CD19P15391 556 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 SLC11A1P49279 550 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 GUCY2FP51841 1108 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 LILRA4P59901 499 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TAP1Q03518 808 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 KRT17Q04695 432 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TAF3Q5VWG9 929 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 GPIHBP1Q8IV16 184 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 COLGALT1Q8NBJ5 622 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM35BQ8NCS4 154 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 THAP11Q96EK4 314 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM169Q96HH4 297 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM176AQ96HP8 235 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 VCPIP1Q96JH7 1222 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 PAAF1Q9BRP4 392 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 NKX2-4Q9H2Z4 354 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 LCMT1Q9UIC8 334 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 PRG3Q9Y2Y8 225 aaPredicted RBP11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 REXO2Q9Y3B8 237 aaKnown RBP11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 GBF1Q92538 1859 aa11.6□□□□□ -0.55
CCDC90B-218ENST00000533761 CTAGE9A4FU28 777 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 C5orf67F2Z3F1 127 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 TMEM189-UBE2V1I3L0A0 370 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 ZNF263O14978 683 aa11.59□□□□□ -0.55
CCDC90B-218ENST00000533761 MMEP08473 750 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms