RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CASP10Q92851 521 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 PPP1R14BQ96C90 147 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 SAE1Q9UBE0 346 aaPredicted RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 A0A087WZ62 844 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 VWA5AO00534 786 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 TNPO2O14787 897 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 FSBPO95073 299 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ENO1P06733 434 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 ABL2P42684 1182 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 COPS2P61201 443 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 STX1BP61266 288 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 TAF1BQ53T94 588 aaPredicted RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 RBM12BQ8IXT5 1001 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 BBS5Q8N3I7 341 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 CDC26Q8NHZ8 85 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ZNF606Q8WXB4 792 aa12.78□□□□□ -0.36
BDNF-218ENST00000533246 ALKBH8Q96BT7 664 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 FDXACB1Q9BRP7 624 aaPredicted RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
BDNF-218ENST00000533246 CASQ2O14958 399 aaPredicted RBP12.77□□□□□ -0.36
BDNF-218ENST00000533246 GZMAP12544 262 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 SERPINB3P29508 390 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 SOX11P35716 441 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 CBX3Q13185 183 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 LLGL2Q6P1M3 1020 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 AFG1LQ8WV93 481 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 CENPKQ9BS16 269 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 BCAP29Q9UHQ4 241 aa12.77□□□□□ -0.36
BDNF-218ENST00000533246 PEX10O60683 326 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 CLCN2P51788 898 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 OTUD4Q01804 1114 aaKnown RBP12.77□□□□□ -0.37
BDNF-218ENST00000533246 PTK7Q13308 1070 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
BDNF-218ENST00000533246 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 LRGUKQ96M69 825 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 APOL2Q9BQE5 337 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 ANGPTL3Q9Y5C1 460 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 HBP1O60381 514 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 RPL21P46778 160 aaKnown RBP12.77□□□□□ -0.37
BDNF-218ENST00000533246 ZNF200P98182 395 aaPredicted RBP12.77□□□□□ -0.37
BDNF-218ENST00000533246 CHST7Q9NS84 486 aa12.77□□□□□ -0.37
BDNF-218ENST00000533246 R3HDM2Q9Y2K5 976 aaKnown RBP12.77□□□□□ -0.37
BDNF-218ENST00000533246 CCT8L1PA6NM43 557 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 PBX1P40424 430 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 RFC5P40937 340 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 SULT1E1P49888 294 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TMTC4Q5T4D3 741 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TNIP3Q96KP6 325 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TMBIM4Q9HC24 238 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 CORO1CQ9ULV4 474 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 KIAA0391O15091 583 aaKnown RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 RARGP13631 454 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 ALOX15P16050 662 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 NAT1P18440 290 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 MX2P20592 715 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TAP1Q03518 808 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 CCL15Q16663 113 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 RABGAP1LQ5R372 815 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 FAM131BQ86XD5 332 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 CCDC60Q8IWA6 550 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 APPL2Q8NEU8 664 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 PWWP2AQ96N64 755 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TSSK1BQ9BXA7 367 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 C17orf75Q9HAS0 396 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 WDR35Q9P2L0 1181 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 ASTN1O14525 1302 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TRIM49D1C9J1S8 452 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 MAP3K7O43318 606 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 PSMD10O75832 226 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 GH1P01241 217 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 TPI1P60174 286 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 NSUN2Q08J23 767 aaKnown RBP eCLIP12.76□□□□□ -0.37
BDNF-218ENST00000533246 GNASQ5JWF2 1037 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 SLC7A14Q8TBB6 771 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 SLC26A7Q8TE54 656 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 FAM111AQ96PZ2 611 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.76□□□□□ -0.37
BDNF-218ENST00000533246 URB1O60287 2271 aaKnown RBP12.76□□□□□ -0.37
BDNF-218ENST00000533246 MYO9BQ13459 2157 aa12.76□□□□□ -0.37
BDNF-218ENST00000533246 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
BDNF-218ENST00000533246 MAP2K7O14733 419 aa12.75□□□□□ -0.37
BDNF-218ENST00000533246 TGFB1I1O43294 461 aa12.75□□□□□ -0.37
BDNF-218ENST00000533246 SLC26A4O43511 780 aa12.75□□□□□ -0.37
BDNF-218ENST00000533246 TLR2O60603 784 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms