RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 KRT79Q5XKE5 535 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 SLC8B1Q6J4K2 584 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PRR23BQ6ZRT6 265 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 TCEAL8Q8IYN2 117 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 MSANTD4Q8NCY6 345 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 DEPDC1BQ8WUY9 529 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 MSANTD3Q96H12 275 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 ASB16Q96NS5 453 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 MMS19Q96T76 1030 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 POLD4Q9HCU8 107 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 ZNF334Q9HCZ1 680 aaPredicted RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 GPRC5CQ9NQ84 441 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 SEMA4GQ9NTN9 838 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 DMXL1Q9Y485 3027 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 MYH10P35580 1976 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 NUP210Q8TEM1 1887 aaPredicted RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PDE2AO00408 941 aaPredicted RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 ACKR2O00590 384 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PRRG1O14668 218 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 MED24O75448 989 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 B3GAT3O94766 335 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PAPSS2O95340 614 aaPredicted RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 PSMC3P17980 439 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CXCL12P48061 93 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 ROR1Q01973 937 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 KCNMA1Q12791 1236 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 UPP1Q16831 310 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 ARSHQ5FYA8 562 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 EEF1DP3Q658K8 133 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 VITQ6UXI7 678 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 APBB1IPQ7Z5R6 666 aaPredicted RBP8.83□□□□□ -1
NEDD8-207ENST00000533242 NELFCDQ8IXH7 590 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CEP112Q8N8E3 955 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 BAP1Q92560 729 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 SMARCD2Q92925 531 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 JAKMIP2Q96AA8 810 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CORO1BQ9BR76 489 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 HAUS4Q9H6D7 363 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 TRPV4Q9HBA0 871 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 ARFGAP3Q9NP61 516 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 SALL4Q9UJQ4 1053 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 RAB21Q9UL25 225 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CAPN6Q9Y6Q1 641 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 PIAS3Q9Y6X2 628 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CITO14578 2027 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 VPS13AQ96RL7 3174 aa8.83□□□□□ -1
NEDD8-207ENST00000533242 CCDC151A5D8V7 595 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 LRRC53A6NM62 1247 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 EIF3CLB5ME19 914 aaKnown RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 H7C4K7 107 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CHRNB1P11230 501 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 IGFBP6P24592 240 aaPredicted RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 GDI1P31150 447 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CLCNKBP51801 687 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CASP5P51878 434 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 SATB1Q01826 763 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 LRRC32Q14392 662 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 C1orf228Q6PIY5 440 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 PDZD4Q76G19 769 aaPredicted RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 MAEAQ7L5Y9 396 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 SPEM1Q8N4L4 309 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 LEMD2Q8NC56 503 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CCDC47Q96A33 483 aaKnown RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 TCEAL4Q96EI5 215 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CAPZA3Q96KX2 299 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 EIF3CQ99613 913 aaKnown RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 MMRN2Q9H8L6 949 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 TUFT1Q9NNX1 390 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 ABCB6Q9NP58 842 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 MYO1AQ9UBC5 1043 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 MAFFQ9ULX9 164 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 INSL5Q9Y5Q6 135 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 DMDP11532 3685 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CHURC1-FNTBB4DL54 471 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 MAP2K7O14733 419 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 HRO43593 1189 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 ATF2P15336 505 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CYP11B2P19099 503 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 OAS2P29728 719 aaKnown RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 NAMPTP43490 491 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 BRCC3P46736 316 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 FNTBP49356 437 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 LIMK1P53667 647 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 PPP2R5AQ15172 486 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 FIGNQ5HY92 759 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 CYP4A22Q5TCH4 519 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 TPGS2Q68CL5 300 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 ZNF771Q7L3S4 317 aaPredicted RBP8.82□□□□□ -1
NEDD8-207ENST00000533242 KIAA1328Q86T90 577 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 LONP2Q86WA8 852 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 FAM114A1Q8IWE2 563 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 ELMOD1Q8N336 334 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 DEPTORQ8TB45 409 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 BSNDQ8WZ55 320 aa8.82□□□□□ -1
NEDD8-207ENST00000533242 E2F7Q96AV8 911 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms