RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 KIF1AQ12756 1690 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 DYRK3O43781 588 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 RHOCP08134 193 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 NR1D1P20393 614 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 EEF1B2P24534 225 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 AARSP49588 968 aaKnown RBP eCLIP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 PCBP1Q15365 356 aaKnown RBP eCLIP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 EFL1Q7Z2Z2 1120 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 METTL16Q86W50 562 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 RNPC3Q96LT9 517 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 UROC1Q96N76 676 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF558Q96NG5 402 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 TSEN34Q9BSV6 310 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 NOP53Q9NZM5 478 aaKnown RBP11.18□□□□□ -0.62
COLCA1-203ENST00000532918 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
COLCA1-203ENST00000532918 GRAP2O75791 330 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 OCM2P0CE71 109 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 OCMP0CE72 109 aaPredicted RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 RENBPP51606 427 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PCSK7Q16549 785 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 SNX31Q8N9S9 440 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 MRGBPQ9NV56 204 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 C5orf58C9J3I9 102 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 SLC9A3R1O14745 358 aaPredicted RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 MYBPC2Q14324 1141 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 STAT4Q14765 748 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PATL1Q86TB9 770 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 MIB1Q86YT6 1006 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 ELMO2Q96JJ3 720 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 TMEM60Q9H2L4 133 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CHCHD3Q9NX63 227 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PLAAQ9Y263 795 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CAPN15O75808 1086 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 APOA4P06727 396 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 FDFT1P37268 417 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 STK4Q13043 487 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 ZBTB41Q5SVQ8 909 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 SLC35G2Q8TBE7 412 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 NMRK1Q9NWW6 199 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PKD2L2Q9NZM6 624 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 ITIH6Q6UXX5 1313 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 LMNAP02545 664 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 POLBP06746 335 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PMS1P54277 932 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CDR2LQ86X02 465 aaPredicted RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 IPMKQ8NFU5 416 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 OSCP1Q8WVF1 389 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 DTNBP1Q96EV8 351 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CIPCQ9C0C6 399 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 SCUBE2Q9NQ36 999 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 MRPL17Q9NRX2 175 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 PPARGC1AQ9UBK2 798 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 NRCAMQ92823 1304 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 ADCY6O43306 1168 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 GALCP54803 685 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 EFEMP1Q12805 493 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 FAM171A1Q5VUB5 890 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 RETSATQ6NUM9 610 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 SLC25A41Q8N5S1 370 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 CYFIP2Q96F07 1278 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 RUSC1Q9BVN2 902 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 IGFLR1Q9H665 355 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 RAB6BQ9NRW1 208 aa11.17□□□□□ -0.62
COLCA1-203ENST00000532918 AAR2Q9Y312 384 aaKnown RBP11.17□□□□□ -0.62
COLCA1-203ENST00000532918 DISP2A7MBM2 1401 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 TBC1D12O60347 775 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 APRTP07741 180 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 TMEM253P0C7T8 217 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SPRP35270 261 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PDCLQ13371 301 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 KRT72Q14CN4 511 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 NAB2Q15742 525 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 APOBEC3HQ6NTF7 200 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 FIBCD1Q8N539 461 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ASB7Q9H672 318 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 CD274Q9NZQ7 290 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 CASTOR2A6NHX0 329 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SLC37A4O43826 429 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 MAGEA9P43362 315 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PDK2Q15119 407 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 CCDC157Q569K6 752 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ERAP2Q6P179 960 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ACOT1Q86TX2 421 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 TFB1MQ8WVM0 346 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms