RNA–Protein interactions for RNA: ENST00000532581.5

GRAMD1B-208, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 2,615 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-208ENST00000532581 LONP2Q86WA8 852 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ENDOVQ8N8Q3 282 aaKnown RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ACTL9Q8TC94 416 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 TLE6Q9H808 572 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 CISHQ9NSE2 258 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 COL11A1P12107 1806 aaPredicted RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ATG7O95352 703 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 CBX6O95503 412 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 CST3P01034 146 aaPredicted RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 KRT7P08729 469 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ADRA1DP25100 572 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 SSTR1P30872 391 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 RFC5P40937 340 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 SLC25A11Q02978 314 aaKnown RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 TAZQ16635 292 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 MAPK6Q16659 721 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 MSS51Q4VC12 460 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 FNBP1LQ5T0N5 605 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 SCARA3Q6AZY7 606 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZPBP2Q6X784 338 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 RHPN2Q8IUC4 686 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 WDTC1Q8N5D0 677 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 NIFKQ9BYG3 293 aaKnown RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 VPS11Q9H270 941 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 NPHS2Q9NP85 383 aa13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZNF214Q9UL59 606 aaPredicted RBP13.75□□□□□ -0.21
GRAMD1B-208ENST00000532581 HARSP12081 509 aaKnown RBP13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 PSMA2P25787 234 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 PTPN4P29074 926 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 EPHB2P29323 1055 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 GDF10P55107 478 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 BACE1P56817 501 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 GAD2Q05329 585 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 TAF11Q15544 211 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 SEZ6Q53EL9 994 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 CYP4A22Q5TCH4 519 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 C3orf62Q6ZUJ4 267 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZNF276Q8N554 614 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 BANPQ8N9N5 519 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 WDR83Q9BRX9 315 aaKnown RBP13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ADCY3O60266 1144 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 FAM189A1O60320 539 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 CST8O60676 142 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 MYL6P60660 151 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 DYNLT1P63172 113 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 CXCL9Q07325 125 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 CAPSQ13938 189 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 HADHQ16836 314 aaKnown RBP13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 CLNKQ7Z7G1 428 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 FBXO36Q8NEA4 188 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 TCP10LQ8TDR4 215 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 FNIP1Q8TF40 1166 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 DCAKDQ8WVC6 231 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 RSAD2Q8WXG1 361 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 MTMR12Q9C0I1 747 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ACAD9Q9H845 621 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 ADAMTS5Q9UNA0 930 aa13.74□□□□□ -0.21
GRAMD1B-208ENST00000532581 RLFQ13129 1914 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 LRCH4O75427 683 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 GM2AP17900 193 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 PAX7P23759 505 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 POLR2BP30876 1174 aaKnown RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 HSPA1LP34931 641 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 RPL22P35268 128 aaKnown RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 SP2Q02086 613 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 CTC1Q2NKJ3 1217 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZNF394Q53GI3 561 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 MTDHQ86UE4 582 aaKnown RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 KCNV2Q8TDN2 545 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 NAF1Q96HR8 494 aaKnown RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 FAXDC2Q96IV6 333 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 NUDCD1Q96RS6 583 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 SAE1Q9UBE0 346 aaPredicted RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 LRRC42Q9Y546 428 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 RFC1P35251 1148 aaPredicted RBP13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 TNFSF9P41273 254 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 BLMHQ13867 455 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 CMPK2Q5EBM0 449 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 PALM2Q8IXS6 379 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 MAF1Q9H063 256 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
GRAMD1B-208ENST00000532581 DOCK1Q14185 1865 aa13.72□□□□□ -0.21
GRAMD1B-208ENST00000532581 SMNDC1O75940 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
GRAMD1B-208ENST00000532581 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
GRAMD1B-208ENST00000532581 TMEM63AO94886 807 aa13.72□□□□□ -0.21
GRAMD1B-208ENST00000532581 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms