RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 THOC1Q96FV9 657 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 HIST1H2AHQ96KK5 128 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 HIST1H2AJQ99878 128 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 CBWD1Q9BRT8 395 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 H2AFJQ9BTM1 129 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ATP5HO75947 161 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 TYK2P29597 1187 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PSMC6P62333 389 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.527e-7■□□□□ 9.8
PTPRK-221ENST00000532331 HIF1AQ16665 826 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 MTMR14Q8NCE2 650 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 SPATA4Q8NEY3 305 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NCLNQ969V3 563 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 SRPK1Q96SB4 655 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 TMEM117Q9H0C3 514 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ZMYM2Q9UBW7 1377 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 CFAP69A5D8W1 941 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NFKBIEO00221 500 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ANP32DO95626 131 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 FGBP02675 491 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PPM1AP35813 382 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 HADHAP40939 763 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ZNF280AP59817 542 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PTK2BQ14289 1009 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 MTF1Q14872 753 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NCAPHQ15003 741 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ADCK2Q7Z695 626 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 C1orf131Q8NDD1 294 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 RUBCNQ92622 972 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PGLYRP2Q96PD5 576 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 ASB7Q9H672 318 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 SNX12Q9UMY4 172 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 TARSL2A2RTX5 802 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 GYG2O15488 501 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 PALB2Q86YC2 1186 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 NUDCD3Q8IVD9 361 aa11.79□□□□□ -0.52
PTPRK-221ENST00000532331 MRPL40Q9NQ50 206 aaKnown RBP11.79□□□□□ -0.52
PTPRK-221ENST00000532331 IFT172Q9UG01 1749 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 PRPF4O43172 522 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■□□□□ 9.8
PTPRK-221ENST00000532331 CYP3A4P08684 503 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
PTPRK-221ENST00000532331 CYP24A1Q07973 514 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 OOSP2Q86WS3 158 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 UNC45BQ8IWX7 931 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 UROC1Q96N76 676 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 GAD1Q99259 594 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MRPL46Q9H2W6 279 aaKnown RBP11.78□□□□□ -0.52
PTPRK-221ENST00000532331 AMACRQ9UHK6 382 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 ZFP69BQ9UJL9 534 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 VPS28Q9UK41 221 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 INHAP05111 366 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 KITP10721 976 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 RAP1GAPP47736 663 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 NR1I3Q14994 352 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MORF4L2Q15014 288 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 TATDN1Q6P1N9 297 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 PPP1R13LQ8WUF5 828 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 CHP1Q99653 195 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 INTUQ9ULD6 942 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 CCDC195A0A1B0GUA6 201 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 NDUFS3O75489 264 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 PYGBP11216 843 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 PKN1Q16512 942 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 SLC13A1Q9BZW2 595 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 PKP3Q9Y446 797 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 KIF13AQ9H1H9 1805 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MYO1DO94832 1006 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 RTN3O95197 1032 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-221ENST00000532331 OXCT1P55809 520 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 FBXW4P57775 412 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 STAT4Q14765 748 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 NAB2Q15742 525 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 EPC2Q52LR7 807 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 ZPBP2Q6X784 338 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 TBC1D1Q86TI0 1168 aaPredicted RBP11.78□□□□□ -0.52
PTPRK-221ENST00000532331 NT5DC4Q86YG4 428 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MFN1Q8IWA4 741 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 KRT35Q92764 455 aa11.78□□□□□ -0.52
PTPRK-221ENST00000532331 MTSS1O43312 755 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 SLITRK3O94933 977 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 NOMO2Q5JPE7 1267 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 MTHFD1LQ6UB35 978 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 CNPY4Q8N129 248 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 SKA1Q96BD8 255 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 PDLIM2Q96JY6 352 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 BTBD6Q96KE9 485 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 ZFATQ9P243 1243 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 FBXL5Q9UKA1 691 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 FAF1Q9UNN5 650 aaPredicted RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 DNAJC8O75937 253 aaPredicted RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 LMNAP02545 664 aaKnown RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 RHOCP08134 193 aa11.77□□□□□ -0.52
PTPRK-221ENST00000532331 EIF4BP23588 611 aaKnown RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 EEF1B2P24534 225 aaKnown RBP11.77□□□□□ -0.52
PTPRK-221ENST00000532331 GCKP35557 465 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms