RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 KCNA1Q09470 495 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 ZNF268Q14587 947 aaPredicted RBP18.63■□□□□ 0.57
PKP3-208ENST00000531857 MTF1Q14872 753 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 PDGFRLQ15198 375 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 CCDC142Q17RM4 750 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 ZNF720Q7Z2F6 126 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 SFR1Q86XK3 245 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 RASSF8Q8NHQ8 419 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 LARP4BQ92615 738 aaKnown RBP18.63■□□□□ 0.57
PKP3-208ENST00000531857 FAM84AQ96KN4 292 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 ECT2Q9H8V3 914 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 L1RE1Q9UN81 338 aa18.63■□□□□ 0.57
PKP3-208ENST00000531857 SOBPA7XYQ1 873 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 K7ELQ4 463 aaPredicted RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 HCRTO43612 131 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 PPP1R37O75864 691 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 IL18RAPO95256 599 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 CD2BP2O95400 341 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 POLR2BP30876 1174 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 SHC2P98077 582 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 AMPD2Q01433 879 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 POU5F1Q01860 360 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 NFE2Q16621 373 aaPredicted RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 DYMQ7RTS9 669 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 TTC16Q8NEE8 873 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 TMX3Q96JJ7 454 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 PKMYT1Q99640 499 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 FAM213AQ9BRX8 229 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 LSM14BQ9BX40 385 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 TRPC7Q9HCX4 862 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 VPS45Q9NRW7 570 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 DUS2Q9NX74 493 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 DDX43Q9NXZ2 648 aaKnown RBP18.62■□□□□ 0.57
PKP3-208ENST00000531857 GTF3C4Q9UKN8 822 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 AGAP1Q9UPQ3 857 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 WNT6Q9Y6F9 365 aa18.62■□□□□ 0.57
PKP3-208ENST00000531857 MYOFQ9NZM1 2061 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 NOL4O94818 638 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 KCNK5O95279 499 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 ITGB3P05106 788 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 DDIT3P35638 169 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 LONP1P36776 959 aaKnown RBP18.61■□□□□ 0.57
PKP3-208ENST00000531857 PNPLA4P41247 253 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 FAM160A1Q05DH4 1040 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 ZNF77Q15935 545 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 FBXO43Q4G163 708 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 INTS6LQ5JSJ4 861 aaKnown RBP18.61■□□□□ 0.57
PKP3-208ENST00000531857 USP49Q70CQ1 688 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 SYT13Q7L8C5 426 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 NT5DC4Q86YG4 428 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 CPA6Q8N4T0 437 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 C1orf127Q8N9H9 656 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
PKP3-208ENST00000531857 OSCP1Q8WVF1 389 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 SAAL1Q96ER3 474 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 TRMT2BQ96GJ1 504 aaKnown RBP18.61■□□□□ 0.57
PKP3-208ENST00000531857 MYRFLQ96LU7 910 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 ACBD6Q9BR61 282 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 STRA6Q9BX79 667 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 CEP295Q9C0D2 2601 aa18.61■□□□□ 0.57
PKP3-208ENST00000531857 RPL10AP62906 217 aaKnown RBP18.6■□□□□ 0.57
PKP3-208ENST00000531857 CREB5Q02930 508 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 PSMD2Q13200 908 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 DMC1Q14565 340 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 EML3Q32P44 896 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 RNF43Q68DV7 783 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 OSTM1Q86WC4 334 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
PKP3-208ENST00000531857 CXorf38Q8TB03 319 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 CD101Q93033 1021 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 EPSTI1Q96J88 318 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 ABCB6Q9NP58 842 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 UXTQ9UBK9 157 aaPredicted RBP18.6■□□□□ 0.57
PKP3-208ENST00000531857 INVSQ9Y283 1065 aa18.6■□□□□ 0.57
PKP3-208ENST00000531857 TNRC6BQ9UPQ9 1833 aaKnown RBP18.59■□□□□ 0.57
PKP3-208ENST00000531857 C2orf78A6NCI8 922 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 ANTXRLA6NF34 631 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 HUS1O60921 280 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 APBB3O95704 486 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 CKMP06732 381 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 USP17L7P0C7H9 530 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 USP4Q13107 963 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 POSTNQ15063 836 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
PKP3-208ENST00000531857 PSAPL1Q6NUJ1 521 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 BRSK2Q8IWQ3 736 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 ARL14EPQ8N8R7 260 aaPredicted RBP18.59■□□□□ 0.57
PKP3-208ENST00000531857 ATP2A3Q93084 1043 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 HVCN1Q96D96 273 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 LINC00597Q9H2U6 94 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 TBC1D7Q9P0N9 293 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 GCNT4Q9P109 453 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 EBF1Q9UH73 591 aa18.59■□□□□ 0.57
PKP3-208ENST00000531857 RALYQ9UKM9 306 aaKnown RBP18.59■□□□□ 0.57
PKP3-208ENST00000531857 TRAV19A0A0A6YYK7 116 aa18.58■□□□□ 0.56
PKP3-208ENST00000531857 BCLAF3A2AJT9 711 aaKnown RBP18.58■□□□□ 0.56
PKP3-208ENST00000531857 GIPC1O14908 333 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms