RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 B3GALT6Q96L58 329 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 TRIM56Q9BRZ2 755 aaKnown RBP7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 EMILIN2Q9BXX0 1053 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 FZD8Q9H461 694 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 ZSCAN16Q9H4T2 348 aaPredicted RBP7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 WDR6Q9NNW5 1121 aaKnown RBP7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 BLOC1S4Q9NUP1 217 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 AGPAT5Q9NUQ2 364 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 MIOSQ9NXC5 875 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 DACT1Q9NYF0 836 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 ZDHHC9Q9Y397 364 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 PCDHB2Q9Y5E7 798 aa7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 SRPRBQ9Y5M8 271 aaKnown RBP7.68□□□□□ -1.18
TRIM53CP-201ENST00000531490 CLUHO75153 1309 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CACNA1IQ9P0X4 2223 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 A0A1B0GUA9 196 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 INPPL1O15357 1258 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TEX28O15482 410 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 KINO60870 393 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TIAF1O95411 115 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CYP11A1P05108 521 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PLA2G4BP0C869 781 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 ZSCAN22P10073 491 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 LIG1P18858 919 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CD72P21854 359 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TGM1P22735 817 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 LONP1P36776 959 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 UBA7P41226 1012 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PEX3P56589 373 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 GPC5P78333 572 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CSTF1Q05048 431 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 MAPK7Q13164 816 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 SNW1Q13573 536 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 HTR4Q13639 388 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TFDP1Q14186 410 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 POU4F3Q15319 338 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 ST3GAL2Q16842 350 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TMEM119Q4V9L6 283 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 ZC3H14Q6PJT7 736 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 TSSK4Q6SA08 328 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 GLB1LQ6UWU2 654 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 C15orf39Q6ZRI6 1047 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 GET4Q7L5D6 327 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PPFIBP1Q86W92 1011 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PALB2Q86YC2 1186 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 SYT2Q8N9I0 419 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 C12orf50Q8NA57 414 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 LINC00301Q8NCQ3 95 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PJA1Q8NG27 643 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 SMG7Q92540 1137 aaKnown RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 NFKBIZQ9BYH8 718 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 BCO2Q9BYV7 579 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CXCL16Q9H2A7 254 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 CYP4F12Q9HCS2 524 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PARD6AQ9NPB6 346 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 SPATA6Q9NWH7 488 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 NCDNQ9UBB6 729 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 EPS15L1Q9UBC2 864 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 PRG3Q9Y2Y8 225 aaPredicted RBP7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 NUMBLQ9Y6R0 609 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 COL4A3Q01955 1670 aa7.67□□□□□ -1.18
TRIM53CP-201ENST00000531490 FASNP49327 2511 aaKnown RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 TDRD15B5MCY1 1934 aaKnown RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 FRYQ5TBA9 3013 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 A0A087X0B3 334 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 CCDC169A6NNP5 214 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 ERLIN2O94905 339 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 ECEL1O95672 775 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 BMP15O95972 392 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 F13A1P00488 732 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 POMCP01189 267 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 LAMP2P13473 410 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 PDIA4P13667 645 aaKnown RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 DRD2P14416 443 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 PLCG1P19174 1290 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 AKAP5P24588 427 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 DDIT3P35638 169 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NAMPTP43490 491 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 MAPK8P45983 427 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NPTX2P47972 431 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NASPP49321 788 aaPredicted RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NTHL1P78549 312 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 GIT2Q14161 759 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 LPAL2Q16609 132 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 RPS26P11Q5JNZ5 115 aaPredicted RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NT5DC1Q5TFE4 455 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 EEF1DP3Q658K8 133 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 CDCA2Q69YH5 1023 aaPredicted RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 PARM1Q6UWI2 310 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 FAM43BQ6ZT52 329 aaPredicted RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 TRIM42Q8IWZ5 723 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 CMASQ8NFW8 434 aaPredicted RBP7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 FGF14Q92915 247 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 AK8Q96MA6 479 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 APOL6Q9BWW8 343 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 CCSER1Q9C0I3 900 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 CCDC113Q9H0I3 377 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 NT5C3AQ9H0P0 336 aa7.66□□□□□ -1.18
TRIM53CP-201ENST00000531490 C7orf69Q9H7B7 122 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms