RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 MYL7Q01449 175 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 NFE2Q16621 373 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 NAIF1Q69YI7 327 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 CEP68Q76N32 757 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 LEO1Q8WVC0 666 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 HPS3Q969F9 1004 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 PKMYT1Q99640 499 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 ACBD6Q9BR61 282 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 TRPC7Q9HCX4 862 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 SEMA4GQ9NTN9 838 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 ITGA11Q9UKX5 1188 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 PTPRJQ12913 1337 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 THADAQ6YHU6 1953 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 EGFP01133 1207 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 TMEM191BP0C7N4 346 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 DDX6P26196 483 aaKnown RBP eCLIP22.27■■□□□ 1.161e-6■■■■□ 21.2
TSPAN4-219ENST00000530404 WDR5BQ86VZ2 330 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 ADGRF2Q8IZF7 708 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 FAM160A2Q8N612 972 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 LRRC52Q8N7C0 313 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 SLC22A12Q96S37 553 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 RTKNQ9BST9 563 aa22.27■■□□□ 1.16
TSPAN4-219ENST00000530404 GDF9O60383 454 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 ATP2C2O75185 946 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 CNR2P34972 360 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 TMEM196Q5HYL7 178 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 PRR23CQ6ZRP0 262 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 MON1AQ86VX9 555 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 SCN4BQ8IWT1 228 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 TMEM86AQ8N2M4 240 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 GPD1LQ8N335 351 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 SYNPOQ8N3V7 929 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 OR5B17Q8NGF7 314 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 CYP2S1Q96SQ9 504 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 KIF9Q9HAQ2 790 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 FBRSL1Q9HCM7 1045 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 GDAP2Q9NXN4 497 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 ZMYM5Q9UJ78 669 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 MTMR6Q9Y217 621 aa22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 TPRP12270 2363 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-219ENST00000530404 NOL4O94818 638 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 PSMC1P62191 440 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 RPL10AP62906 217 aaKnown RBP22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 RBP5P82980 135 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 GRSF1Q12849 480 aaKnown RBP eCLIP22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 ALCAMQ13740 583 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 SLC39A14Q15043 492 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 CCDC6Q16204 474 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 SOWAHAQ2M3V2 549 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 CC2D1AQ6P1N0 951 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 SPATA2LQ8IUW3 424 aaPredicted RBP22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 TOP6BLQ8N6T0 577 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 ANKRD36BP1Q96IX9 119 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 ABCA7Q8IZY2 2146 aa22.25■■□□□ 1.15
TSPAN4-219ENST00000530404 TRDMT1O14717 391 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 AXIN1O15169 862 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 LRP3O75074 770 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 RNF40O75150 1001 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 MTF1Q14872 753 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 CBWD2Q8IUF1 395 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 CCDC65Q8IXS2 484 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 CNTNAP3BQ96NU0 1288 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 CNTNAP3Q9BZ76 1288 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 TMEM206Q9H813 350 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 ABCB6Q9NP58 842 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 INTS13Q9NVM9 706 aa22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 UXTQ9UBK9 157 aaPredicted RBP22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 MYO18AQ92614 2054 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 CNOT1A5YKK6 2376 aaKnown RBP22.24■■□□□ 1.15
TSPAN4-219ENST00000530404 C2orf78A6NCI8 922 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 GABRDO14764 452 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 LMO2P25791 158 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 GJA4P35212 333 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 LHX1P48742 406 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 GALK1P51570 392 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 ZNF268Q14587 947 aaPredicted RBP22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 ZNF77Q15935 545 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 CSRP2Q16527 193 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 NETO1Q8TDF5 533 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 KBTBD7Q8WVZ9 684 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 MYLPFQ96A32 169 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 TRMT2BQ96GJ1 504 aaKnown RBP22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 SYT15Q9BQS2 421 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 SLC8A2Q9UPR5 921 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 WNT6Q9Y6F9 365 aa22.23■■□□□ 1.15
TSPAN4-219ENST00000530404 CKMP06732 381 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 PCSK1P29120 753 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 HOXA6P31267 233 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 FAM160A1Q05DH4 1040 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 STK38Q15208 465 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 ARL14EPQ8N8R7 260 aaPredicted RBP22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 HPDLQ96IR7 371 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 MYRFLQ96LU7 910 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 HHIPQ96QV1 700 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 ARRDC1-AS1Q9H2J1 176 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 ECT2Q9H8V3 914 aa22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 DUS2Q9NX74 493 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 R3HCC1Q9Y3T6 440 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-219ENST00000530404 CACNA1BQ00975 2339 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms