RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 SMTNL2Q2TAL5 461 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 NAIF1Q69YI7 327 aaPredicted RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 C1orf131Q8NDD1 294 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 CYGBQ8WWM9 190 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 MMTAG2Q9BU76 263 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 KCNH7Q9NS40 1196 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 OLA1Q9NTK5 396 aaKnown RBP16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
PCDHA4-203ENST00000530339 SGPL1O95470 568 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 C11orf63Q6NUN7 778 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ATPAF2Q8N5M1 289 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 EGFL8Q99944 293 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 PI4K2AQ9BTU6 479 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 HACD3Q9P035 362 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 UBA6A0AVT1 1052 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 RIPK2O43353 540 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 FGFR2P21802 821 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CASP4P49662 377 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 KCNA1Q09470 495 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 SREBF2Q12772 1141 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ILF2Q12905 390 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CLEC4FQ8N1N0 589 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 TMEM143Q96AN5 459 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 PGM2Q96G03 612 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 GMCL1Q96IK5 515 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 RUSC1Q9BVN2 902 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 SARS2Q9NP81 518 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ABCF3Q9NUQ8 709 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 TEKT2Q9UIF3 430 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 DCCP43146 1447 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 EEF2KO00418 725 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CDH2P19022 906 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 MCL1Q07820 350 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ADCK1Q86TW2 530 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 TSEN2Q8NCE0 465 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ASIC4Q96FT7 647 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 SIK2Q9H0K1 926 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 ERAP1Q9NZ08 941 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 MSH4O15457 936 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 MED24O75448 989 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CDR2LQ86X02 465 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 PTPRN2Q92932 1015 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CAAP1Q9H8G2 361 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 CHCHD3Q9NX63 227 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 COL3A1P02461 1466 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-203ENST00000530339 BNIP3LO60238 219 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 FKBP6O75344 327 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 MRPS15P82914 257 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 SLC44A4Q53GD3 710 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 WLSQ5T9L3 541 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 PIN4Q9Y237 131 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM237AA0A1B0GTK4 181 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 DFFAO00273 331 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 SYF2O95926 243 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 RGS7P49802 495 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 FBXO36Q8NEA4 188 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 RUBCNLQ9H714 662 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 CYP11B1P15538 503 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 CUL2Q13617 745 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 GIT2Q14161 759 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 CCNG2Q16589 344 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 KIAA0895Q8NCT3 520 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 RSPH10B2B2RC85 870 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 GLRA3O75311 464 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 RSPH10BP0C881 870 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 NUDT2P50583 147 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 TRMT5Q32P41 509 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 NAPEPLDQ6IQ20 393 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 IFNEQ86WN2 208 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 NUP93Q8N1F7 819 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 PRDM5Q9NQX1 630 aaPredicted RBP16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 NAALADL1Q9UQQ1 740 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
PCDHA4-203ENST00000530339 TM9SF1O15321 606 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 AKAP3O75969 853 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 ZNF157P51786 506 aaPredicted RBP16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 RBBP7Q16576 425 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 PLA2G4FQ68DD2 849 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 TTC30AQ86WT1 665 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 DUSP9Q99956 384 aaKnown RBP16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 ARHGEF38Q9NXL2 777 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 SEPT3Q9UH03 358 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 VPS9D1Q9Y2B5 631 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 FAM205AQ6ZU69 1335 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 GOLGA8TH3BQL2 631 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 AASDHQ4L235 1098 aaPredicted RBP16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 PDCD6IPQ8WUM4 868 aaKnown RBP16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 PAFAH2Q99487 392 aa16.04■□□□□ 0.16
PCDHA4-203ENST00000530339 PALMDQ9NP74 551 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 253.4 ms