RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SRGAP2O75044 1071 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 EFEMP2O95967 443 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 DNAJB2P25686 324 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 CTNNB1P35222 781 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 PPP1R2P3Q6NXS1 205 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 DSTYKQ6XUX3 929 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SYCE1Q8N0S2 351 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 LRRN4CLQ8ND94 238 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 TRIM11Q96F44 468 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SENP8Q96LD8 212 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 NT5C1AQ9BXI3 368 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 TLR10Q9BXR5 811 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 GPR62Q9BZJ7 368 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 CNOT8Q9UFF9 292 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SCN1AP35498 2009 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 C5orf67F2Z3F1 127 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 M0QZQ0 153 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 FGF18O76093 207 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 LSM8O95777 96 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MYBL1P10243 752 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 HADHBP55084 474 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 ERVK-21P61565 698 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 WHAMMP3Q1A5X7 153 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SOWAHAQ2M3V2 549 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 C2CD6Q53TS8 623 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 PPP2R2DQ66LE6 453 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MON1BQ7L1V2 547 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SLFN11Q7Z7L1 901 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 KLHL23Q8NBE8 558 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 TMEM35BQ8NCS4 154 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 C1orf131Q8NDD1 294 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MNS1Q8NEH6 495 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 HEXIM2Q96MH2 286 aaKnown RBP15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SAMD11Q96NU1 681 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 NUP85Q9BW27 656 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SLC28A3Q9HAS3 691 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 HYOU1Q9Y4L1 999 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 CEP83Q9Y592 693 aa15.26■□□□□ 0.03
TTC39A-216ENST00000530004 SF3B1O75533 1304 aaKnown RBP eCLIP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 CYB561D2O14569 222 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 VDRP11473 427 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 ELAVL2Q12926 359 aaKnown RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 DPH6Q7L8W6 267 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 LIMS2Q7Z4I7 341 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 PHF13Q86YI8 300 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 RNF168Q8IYW5 571 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 ZNF564Q8TBZ8 553 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 TIFAQ96CG3 184 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 CALR3Q96L12 384 aaKnown RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 PSMB7Q99436 277 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 C11orf70Q9BRQ4 267 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 VN1R3Q9BXE9 311 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 AVENQ9NQS1 362 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 UVRAGQ9P2Y5 699 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
TTC39A-216ENST00000530004 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
TTC39A-216ENST00000530004 ZNF185O15231 689 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 CTIFO43310 598 aaKnown RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 HUS1O60921 280 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 MTA2O94776 668 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 RB1P06400 928 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PRLRP16471 622 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 TCP1P17987 556 aaKnown RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 RRM1P23921 792 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 CDH5P33151 784 aaPredicted RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 DNA2P51530 1060 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 KRT17Q04695 432 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PTPROQ16827 1216 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 SGO2Q562F6 1265 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 MMS22LQ6ZRQ5 1243 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PEX26Q7Z412 305 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PHLDB2Q86SQ0 1253 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 DDX53Q86TM3 631 aaKnown RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 TOP6BLQ8N6T0 577 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 APPL2Q8NEU8 664 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 OR6B3Q8NGW1 331 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 VCPIP1Q96JH7 1222 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 OSBPL9Q96SU4 736 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 ZNF518BQ9C0D4 1074 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 KIAA1257Q9ULG3 409 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PCDHB8Q9UN66 801 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 NME7Q9Y5B8 376 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 MYH10P35580 1976 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 SYN3O14994 580 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 MICAL2O94851 1124 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 ODC1P11926 461 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 MMP8P22894 467 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 CXCR5P32302 372 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms