RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 LRRC63Q05C16 580 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ENPEPQ07075 957 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 STIM1Q13586 685 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RTP2Q5QGT7 225 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CEP135Q66GS9 1140 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SCARA3Q6AZY7 606 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FOXR2Q6PJQ5 311 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TMEM184AQ6ZMB5 413 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TRAPPC11Q7Z392 1133 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CEP57Q86XR8 500 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 WDR49Q8IV35 697 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 WDR75Q8IWA0 830 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ZC3H3Q8IXZ2 948 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 GJD3Q8N144 294 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CSGALNACT2Q8N6G5 542 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 EFHBQ8N7U6 833 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 C1orf127Q8N9H9 656 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 MLKLQ8NB16 471 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 OR5B17Q8NGF7 314 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PLEKHO2Q8TD55 490 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 RIN2Q8WYP3 895 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 CCDC127Q96BQ5 260 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PABPC5Q96DU9 382 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 ANKRD36BP1Q96IX9 119 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 B3GALT6Q96L58 329 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 AGAP3Q96P47 875 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 KLHL5Q96PQ7 755 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 EMILIN2Q9BXX0 1053 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 FNIP2Q9P278 1114 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SUFUQ9UMX1 484 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 COG5Q9UP83 839 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
ATPAF1-209ENST00000529214 PLXNA4Q9HCM2 1894 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TRIP11Q15643 1979 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PRRC2BQ5JSZ5 2229 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PTPRJQ12913 1337 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 XIRP2A4UGR9 3374 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 FSD2A1L4K1 749 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TRIM49BA6NDI0 452 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TRIM64CA6NLI5 447 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LRRIQ3A6PVS8 624 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 KPNA7A9QM74 516 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 I3L4J1 428 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TEX28O15482 410 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LINC01565O15544 149 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 KLF4O43474 513 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TBC1D4O60343 1298 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CLASP2O75122 1294 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PPFIA2O75334 1257 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 C1RP00736 705 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TNNC2P02585 160 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 C4BPAP04003 597 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 ITGB3P05106 788 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TMEM191BP0C7N4 346 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 DLATP10515 647 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 KLRC2P26717 231 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TKTP29401 623 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CA8P35219 290 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PNPLA4P41247 253 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TAF6P49848 677 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 VAMP7P51809 220 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 AP3M2P53677 418 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 DLG4P78352 724 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 RBP5P82980 135 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 ZSCAN26Q16670 478 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LMBRD2Q68DH5 695 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TTI2Q6NXR4 508 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PDXDC1Q6P996 788 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LILRA6Q6PI73 481 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 RBM43Q6ZSC3 357 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 INTS8Q75QN2 995 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TAX1BP1Q86VP1 789 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PPFIBP1Q86W92 1011 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LMNTD2Q8IXW0 634 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 LRRC52Q8N7C0 313 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PHC3Q8NDX5 983 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 APPL2Q8NEU8 664 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 SLC22A17Q8WUG5 538 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 C17orf50Q8WW18 174 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 NELFBQ8WX92 580 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 EEF2KMTQ96G04 330 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 SENP8Q96LD8 212 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CGRRF1Q99675 332 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 TSG101Q99816 390 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 USB1Q9BQ65 265 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CLSTN3Q9BQT9 956 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 MTMR12Q9C0I1 747 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 PRDM6Q9NQX0 595 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 ZNF358Q9NW07 568 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 SIX4Q9UIU6 781 aa6.72□□□□□ -1.33
ATPAF1-209ENST00000529214 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms