RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
CAPN1-217ENST00000529133 ABHD10Q9NUJ1 306 aa12.16□□□□□ -0.46
CAPN1-217ENST00000529133 ABI2Q9NYB9 513 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-217ENST00000529133 LMCD1Q9NZU5 365 aa12.16□□□□□ -0.46
CAPN1-217ENST00000529133 IMPACTQ9P2X3 320 aa12.16□□□□□ -0.46
CAPN1-217ENST00000529133 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
CAPN1-217ENST00000529133 NOCTQ9UK39 431 aaKnown RBP12.16□□□□□ -0.46
CAPN1-217ENST00000529133 PCDHB5Q9Y5E4 795 aa12.16□□□□□ -0.46
CAPN1-217ENST00000529133 ATP8B3O60423 1300 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 PER2O15055 1255 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TGM5O43548 720 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 GLUD1P00367 558 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 CCDC172P0C7W6 258 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 POU3F3P20264 500 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 ADORA2BP29275 332 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 HNRNPH3P31942 346 aaKnown RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 PRKCIP41743 596 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 NRIP1P48552 1158 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 CLCN4P51793 760 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 SMARCB1Q12824 385 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 STILQ15468 1287 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 CFAP221Q4G0U5 840 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TCEAL5Q5H9L2 206 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TAF3Q5VWG9 929 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 LILRA6Q6PI73 481 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 Q7L0L9 218 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 RBM23Q86U06 439 aaKnown RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TTC9BQ8N6N2 239 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 C2orf15Q8WU43 125 aaKnown RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 ZNF606Q8WXB4 792 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 DDX1Q92499 740 aaKnown RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 FUBP3Q96I24 572 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 MED10Q9BTT4 135 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TLE6Q9H808 572 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 ABCB6Q9NP58 842 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 FBXW11Q9UKB1 542 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 TSPAN16Q9UKR8 245 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN1-217ENST00000529133 MTCH2Q9Y6C9 303 aa12.15□□□□□ -0.46
CAPN1-217ENST00000529133 ATG2AQ2TAZ0 1938 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 GOLGA6L6A8MZA4 724 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 MED7O43513 233 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 MICAL2O94851 1124 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 SEC24AO95486 1093 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 C1RP00736 705 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CFHP08603 1231 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 SKILP12757 684 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 ATF2P15336 505 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 EPCAMP16422 314 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CHRNB2P17787 502 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 BDNFP23560 247 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CYP2F1P24903 491 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CACNA2D1P54289 1103 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CDR2Q01850 454 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 ADCY1Q08828 1119 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 DUSP4Q13115 394 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CNGA2Q16280 664 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 HGSNATQ68CP4 663 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 DENND1BQ6P3S1 775 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 WDR59Q6PJI9 974 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 OLIG1Q8TAK6 271 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 SMARCD1Q96GM5 515 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CDCA3Q99618 268 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-217ENST00000529133 SYT11Q9BT88 431 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 CYP4F11Q9HBI6 524 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 TMEM30AQ9NV96 361 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 MAFFQ9ULX9 164 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 SLC27A5Q9Y2P5 690 aa12.14□□□□□ -0.47
CAPN1-217ENST00000529133 M0QYV0 167 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 AP1G2O75843 785 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SOAT2O75908 522 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SERPING1P05155 500 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 MMEP08473 750 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 FAM200BP0CF97 657 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HAPLN1P10915 354 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-217ENST00000529133 IGFBP4P22692 258 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.474e-13■■■■□ 21.8
CAPN1-217ENST00000529133 MAGEA11P43364 429 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 RBM10P98175 930 aaKnown RBP12.13□□□□□ -0.47
CAPN1-217ENST00000529133 FMO1Q01740 532 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 KLHL30Q0D2K2 578 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 HYAL1Q12794 435 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 MEA1Q16626 185 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 PKDCCQ504Y2 493 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 VSTM1Q6UX27 236 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-217ENST00000529133 ZNF677Q86XU0 584 aa12.13□□□□□ -0.47
CAPN1-217ENST00000529133 TCEAL8Q8IYN2 117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms