RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SLC8A2Q9UPR5 921 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 CCL26Q9Y258 94 aa16.77■□□□□ 0.28
CTSB-215ENST00000528965 KIF26AQ9ULI4 1882 aaPredicted RBP16.77■□□□□ 0.27
CTSB-215ENST00000528965 TRAV19A0A0A6YYK7 116 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 CCDC163A0A0D9SF12 145 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 TRDMT1O14717 391 aaKnown RBP16.76■□□□□ 0.27
CTSB-215ENST00000528965 HRO43593 1189 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 CKMP06732 381 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 USP17L7P0C7H9 530 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
CTSB-215ENST00000528965 CYP2F1P24903 491 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 DMWDQ09019 674 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 STK38Q15208 465 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 MAPRE1Q15691 268 aaKnown RBP16.76■□□□□ 0.27
CTSB-215ENST00000528965 CSRP2Q16527 193 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 DDR2Q16832 855 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 WDR44Q5JSH3 913 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 DPH6Q7L8W6 267 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 MYRFLQ96LU7 910 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 USP28Q96RU2 1077 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 BACH2Q9BYV9 841 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 CUEDC2Q9H467 287 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 PCIF1Q9H4Z3 704 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 KIAA1586Q9HCI6 787 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 TRPC7Q9HCX4 862 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 HPS4Q9NQG7 708 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
CTSB-215ENST00000528965 ZNF233A6NK53 670 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 PRPF6O94906 941 aaKnown RBP16.75■□□□□ 0.27
CTSB-215ENST00000528965 DRD1P21728 446 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 MAGEA11P43364 429 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 IFNAR2P48551 515 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 AMPD3Q01432 767 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 SRSF5Q13243 272 aaKnown RBP16.75■□□□□ 0.27
CTSB-215ENST00000528965 KCNB1Q14721 858 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 MTF1Q14872 753 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 FBXO43Q4G163 708 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 SDHAF4Q5VUM1 108 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 TRIM68Q6AZZ1 485 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 PRR23CQ6ZRP0 262 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 SCN4BQ8IWT1 228 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 PDILTQ8N807 584 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 ZSWIM2Q8NEG5 633 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 ATP2A3Q93084 1043 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 CEP295NLQ96MC4 621 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 PKMYT1Q99640 499 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 SYT15Q9BQS2 421 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 FGFBP2Q9BYJ0 223 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 INTS13Q9NVM9 706 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 EHD2Q9NZN4 543 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 GTF3C4Q9UKN8 822 aa16.75■□□□□ 0.27
CTSB-215ENST00000528965 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.75■□□□□ 0.27
CTSB-215ENST00000528965 A0A087X0B3 334 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 GABRDO14764 452 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 SLC30A4O14863 429 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 EIF3DO15371 548 aaKnown RBP eCLIP16.74■□□□□ 0.27
CTSB-215ENST00000528965 TADA3O75528 432 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 RPP40O75818 363 aaKnown RBP16.74■□□□□ 0.27
CTSB-215ENST00000528965 ANXA13P27216 316 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
CTSB-215ENST00000528965 USP4Q13107 963 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 OSTM1Q86WC4 334 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 FAM160A2Q8N612 972 aaPredicted RBP16.74■□□□□ 0.27
CTSB-215ENST00000528965 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 CCDC26Q8TAB7 109 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 OSCP1Q8WVF1 389 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 GAB3Q8WWW8 586 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 HPDLQ96IR7 371 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 P2RY13Q9BPV8 354 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
CTSB-215ENST00000528965 MAGEC2Q9UBF1 373 aaPredicted RBP16.74■□□□□ 0.27
CTSB-215ENST00000528965 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 CDH9Q9ULB4 789 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 DNAH14Q0VDD8 3507 aa16.74■□□□□ 0.27
CTSB-215ENST00000528965 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.73■□□□□ 0.27
CTSB-215ENST00000528965 STX6O43752 255 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 AKAP3O75969 853 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 ARSAP15289 507 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 PFKLP17858 780 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 ASIC1P78348 528 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 NR1H3Q13133 447 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 SOWAHAQ2M3V2 549 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 LMBRD2Q68DH5 695 aaPredicted RBP16.73■□□□□ 0.27
CTSB-215ENST00000528965 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 CACNA2D4Q7Z3S7 1137 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 WDR49Q8IV35 697 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 CAMKK1Q8N5S9 505 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 TTC16Q8NEE8 873 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 DDX1Q92499 740 aaKnown RBP16.73■□□□□ 0.27
CTSB-215ENST00000528965 ACDQ96AP0 544 aa16.73■□□□□ 0.27
CTSB-215ENST00000528965 ZNF396Q96N95 335 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms