RNA–Protein interactions for RNA: ENST00000528494.5

ATG13-211, Transcript of autophagy related 13, humanhuman

TSL 1 (best) BASIC

Gene ATG13, Length 2,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-211ENST00000528494 NT5DC4Q86YG4 428 aa13.51□□□□□ -0.25
ATG13-211ENST00000528494 DEFB118Q96PH6 123 aa13.51□□□□□ -0.25
ATG13-211ENST00000528494 C11orf70Q9BRQ4 267 aa13.51□□□□□ -0.25
ATG13-211ENST00000528494 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
ATG13-211ENST00000528494 CNOT8Q9UFF9 292 aaKnown RBP13.51□□□□□ -0.25
ATG13-211ENST00000528494 CORO1CQ9ULV4 474 aaPredicted RBP13.51□□□□□ -0.25
ATG13-211ENST00000528494 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATG13-211ENST00000528494 NCANO14594 1321 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 TLR3O15455 904 aaKnown RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 AHCYL1O43865 530 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 MGEA5O60502 916 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 RTN3O95197 1032 aaPredicted RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 FESP07332 822 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 P4HA1P13674 534 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 NR1D1P20393 614 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 RRM1P23921 792 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 MLH1P40692 756 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 SCTRP47872 440 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 LPIN1Q14693 890 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 MESDQ14696 234 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 C9orf57Q5W0N0 161 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 EMBQ6PCB8 327 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 ZNF513Q8N8E2 541 aaPredicted RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 GAD1Q99259 594 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 ELOVL4Q9GZR5 314 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 TRIP11Q15643 1979 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 CITO14578 2027 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 KCNK3O14649 394 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 COQ9O75208 318 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 CYP1A1P04798 512 aaPredicted RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 IGFBP6P24592 240 aaPredicted RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 RAD23BP54727 409 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 RHOT2Q8IXI1 618 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 MCOLN2Q8IZK6 566 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 HEXIM2Q96MH2 286 aaKnown RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 ZIM3Q96PE6 472 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 BAIAP2L1Q9UHR4 511 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 UBQLN1Q9UMX0 589 aaKnown RBP13.5□□□□□ -0.25
ATG13-211ENST00000528494 C15orf41Q9Y2V0 281 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 DERAQ9Y315 318 aa13.5□□□□□ -0.25
ATG13-211ENST00000528494 KBTBD13C9JR72 458 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 KRT14P02533 472 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 NEFHP12036 1026 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 CKBP12277 381 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ITGA4P13612 1032 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 NDST1P52848 882 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 PRMT2P55345 433 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 YWHAEP62258 255 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 NOMO3P69849 1222 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 LACTB2Q53H82 288 aaPredicted RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 SLC30A9Q6PML9 568 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 CPNE8Q86YQ8 564 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 C1orf131Q8NDD1 294 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 TRIM7Q9C029 511 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 YIPF3Q9GZM5 350 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ADAM22Q9P0K1 906 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 PTGESO14684 152 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 CILPO75339 1184 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 GJB6O95452 261 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ANP32DO95626 131 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 TCP1P17987 556 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 ELF3P78545 371 aaPredicted RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 CENPCQ03188 943 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 C2orf54Q08AI8 447 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 NT5DC3Q86UY8 548 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ZNF564Q8TBZ8 553 aaPredicted RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 TMEM176AQ96HP8 235 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ADAM2Q99965 735 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
ATG13-211ENST00000528494 RNF208Q9H0X6 261 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 VRTNQ9H8Y1 702 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 GTF3C4Q9UKN8 822 aa13.49□□□□□ -0.25
ATG13-211ENST00000528494 ATP8B3O60423 1300 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 SPTLC1O15269 473 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 HCRTO43612 131 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 DNAJC8O75937 253 aaPredicted RBP13.48□□□□□ -0.25
ATG13-211ENST00000528494 KIF4AO95239 1232 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 CYP1A2P05177 515 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 SLFN11Q7Z7L1 901 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 SYCE1Q8N0S2 351 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 P3H4Q92791 437 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 CAVIN3Q969G5 261 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 ERVK-5Q9HDB9 667 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 CHST12Q9NRB3 414 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 MIOSQ9NXC5 875 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 AMFRQ9UKV5 643 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
ATG13-211ENST00000528494 ALG6Q9Y672 507 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms