RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 COPS2P61201 443 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 SNRPFP62306 86 aaKnown RBP13.73□□□□□ -0.21
RBM39-243ENST00000528062 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
RBM39-243ENST00000528062 MAP4K3Q8IVH8 894 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 SRRM1Q8IYB3 904 aaKnown RBP13.73□□□□□ -0.21
RBM39-243ENST00000528062 LINC01465Q8N7H1 131 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 C9orf72Q96LT7 481 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 LGALS13Q9UHV8 139 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 ARL2BPQ9Y2Y0 163 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 COL1A2P08123 1366 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 IGKV6-21A0A0C4DH24 114 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 EN2P19622 333 aaPredicted RBP13.73□□□□□ -0.21
RBM39-243ENST00000528062 MYO1EQ12965 1108 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 SYDE1Q6ZW31 735 aaPredicted RBP13.73□□□□□ -0.21
RBM39-243ENST00000528062 SESTD1Q86VW0 696 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 KIRREL3Q8IZU9 778 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 KIFAP3Q92845 792 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 WNT8BQ93098 351 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 MFSD14AQ96MC6 490 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 EURLQ9NYK6 297 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 UMODL1Q5DID0 1318 aa13.73□□□□□ -0.21
RBM39-243ENST00000528062 DENND3A2RUS2 1198 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 MBLAC1A4D2B0 266 aaPredicted RBP13.72□□□□□ -0.21
RBM39-243ENST00000528062 MAFO75444 373 aaPredicted RBP13.72□□□□□ -0.21
RBM39-243ENST00000528062 GAS8O95995 478 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 CFHP08603 1231 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ATP5DP30049 168 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 TAS2R40P59535 323 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 CYP24A1Q07973 514 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ASRGL1Q7L266 308 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 UBE2Q1Q7Z7E8 422 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ATL2Q8NHH9 583 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 KLHL29Q96CT2 875 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 FBXL18Q96ME1 805 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ARHGEF3Q9NR81 526 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 NRCAMQ92823 1304 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 TREHO43280 583 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 CABYRO75952 493 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 TAC1P20366 129 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 STX2P32856 288 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 EMC2Q15006 297 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ZNF484Q5JVG2 852 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 LRRC71Q8N4P6 559 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 NSMCE1Q8WV22 266 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 POMGNT1Q8WZA1 660 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 RXFP1Q9HBX9 757 aa13.72□□□□□ -0.21
RBM39-243ENST00000528062 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
RBM39-243ENST00000528062 ANP32DO95626 131 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 BRD2P25440 801 aaKnown RBP13.71□□□□□ -0.21
RBM39-243ENST00000528062 MAN1A1P33908 653 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 CDK7P50613 346 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 WDR4P57081 412 aaKnown RBP13.71□□□□□ -0.21
RBM39-243ENST00000528062 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
RBM39-243ENST00000528062 MTHFD1LQ6UB35 978 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 GRK7Q8WTQ7 553 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 MAGEB18Q96M61 343 aa13.71□□□□□ -0.21
RBM39-243ENST00000528062 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.21
RBM39-243ENST00000528062 TRMT13Q9NUP7 481 aaKnown RBP13.71□□□□□ -0.21
RBM39-243ENST00000528062 DGAT1O75907 488 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 SSTR3P32745 418 aaPredicted RBP13.71□□□□□ -0.22
RBM39-243ENST00000528062 CLCN3P51790 818 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 WNT7BP56706 349 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 GCNT1Q02742 428 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 CAV1Q03135 178 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 IZUMO3Q5VZ72 239 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 C7orf31Q8N865 590 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 GBP7Q8N8V2 638 aaPredicted RBP13.71□□□□□ -0.22
RBM39-243ENST00000528062 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 TMEM143Q96AN5 459 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 MIEF2Q96C03 454 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 THOC1Q96FV9 657 aaKnown RBP13.71□□□□□ -0.22
RBM39-243ENST00000528062 PAWRQ96IZ0 340 aaKnown RBP13.71□□□□□ -0.22
RBM39-243ENST00000528062 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 SUFUQ9UMX1 484 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 EXOC7Q9UPT5 735 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 STK38LQ9Y2H1 464 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 C15orf41Q9Y2V0 281 aa13.71□□□□□ -0.22
RBM39-243ENST00000528062 B4GALT4O60513 344 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 CDH16O75309 829 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 PROSCO94903 275 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 GCAP28676 217 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 SLC1A1P43005 524 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 POLGP54098 1239 aaPredicted RBP13.7□□□□□ -0.22
RBM39-243ENST00000528062 CENPCQ03188 943 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 FAM47EQ6ZV65 393 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 MON1BQ7L1V2 547 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
RBM39-243ENST00000528062 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms