RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 EGFP01133 1207 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 CEBPZQ03701 1054 aaKnown RBP11.36□□□□□ -0.59
CPSF1-203ENST00000527916 LMAN2Q12907 356 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 MYBPC2Q14324 1141 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 TAF12Q16514 161 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
CPSF1-203ENST00000527916 SPATA1Q5VX52 437 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 CENPPQ6IPU0 288 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 KIAA1211LQ6NV74 962 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 CC2D1AQ6P1N0 951 aaPredicted RBP11.36□□□□□ -0.59
CPSF1-203ENST00000527916 DYMQ7RTS9 669 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 CYP2U1Q7Z449 544 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 DEFB124Q8NES8 71 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 ZNF396Q96N95 335 aaPredicted RBP11.36□□□□□ -0.59
CPSF1-203ENST00000527916 FAM83CQ9BQN1 747 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 OLFML3Q9NRN5 406 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 TUBGCP4Q9UGJ1 667 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 SLC27A5Q9Y2P5 690 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 PI4KAP42356 2102 aa11.36□□□□□ -0.59
CPSF1-203ENST00000527916 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 ANKRD63C9JTQ0 380 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 H0Y626 953 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 CDX4O14627 284 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 HYAL3O43820 417 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 TRIM16O95361 564 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 VNN2O95498 520 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 YEATS4O95619 227 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 OR4Q2P0C623 313 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 AVPR1AP37288 418 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 STAT6P42226 847 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 TUFMP49411 452 aaKnown RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 DGKEP52429 567 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 BFSP1Q12934 665 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 ALCAMQ13740 583 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 DMC1Q14565 340 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 PMS2CLQ68D20 193 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 ADALQ6DHV7 355 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 SFR1Q86XK3 245 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 P2RY13Q9BPV8 354 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 LRRC27Q9C0I9 530 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 CRISPLD1Q9H336 500 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 EBF3Q9H4W6 596 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 MRPL44Q9H9J2 332 aaKnown RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 AGO2Q9UKV8 859 aaKnown RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 EXOC7Q9UPT5 735 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 PCDHB13Q9Y5F0 798 aa11.35□□□□□ -0.59
CPSF1-203ENST00000527916 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 ZNF638Q14966 1978 aaKnown RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 ASH1LQ9NR48 2969 aaKnown RBP11.35□□□□□ -0.59
CPSF1-203ENST00000527916 A0A087X0B3 334 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 ANO9A1A5B4 782 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 MTMR11A4FU01 709 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 PIRO00625 290 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 SPTLC2O15270 562 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 TYMPP19971 482 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 DDX6P26196 483 aaKnown RBP eCLIP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 GALK1P51570 392 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 LILRA4P59901 499 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 IRX4P78413 519 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 CYP4F8P98187 520 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 SPAG1Q07617 926 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 PDGFRLQ15198 375 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 STK38Q15208 465 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 L1TD1Q5T7N2 865 aaKnown RBP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 OVOS1Q6IE37 1185 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 DSTYKQ6XUX3 929 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 NT5DC4Q86YG4 428 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 CMTM8Q8IZV2 173 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 TSTD1Q8NFU3 115 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 ACCSQ96QU6 501 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 NUSAP1Q9BXS6 441 aaKnown RBP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 SLC46A2Q9BY10 475 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 SMG9Q9H0W8 520 aaKnown RBP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 TNMDQ9H2S6 317 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 CUEDC2Q9H467 287 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 HPS4Q9NQG7 708 aa11.34□□□□□ -0.59
CPSF1-203ENST00000527916 POLR3BQ9NW08 1133 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 EVLQ9UI08 416 aaPredicted RBP11.34□□□□□ -0.59
CPSF1-203ENST00000527916 ASXL3Q9C0F0 2248 aa11.33□□□□□ -0.59
CPSF1-203ENST00000527916 SCN1AP35498 2009 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CUTAO60888 179 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 LDHAP00338 332 aaKnown RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 CYP11A1P05108 521 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 GARTP22102 1010 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 ADSSP30520 456 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 DHPSP49366 369 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 ACOT2P49753 483 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 SIM1P81133 766 aaPredicted RBP11.33□□□□□ -0.6
CPSF1-203ENST00000527916 PSMD2Q13200 908 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 TMEM132DQ14C87 1099 aa11.33□□□□□ -0.6
CPSF1-203ENST00000527916 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms