RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.78■□□□□ 0.12
USP47-207ENST00000527733 ZNF536O15090 1300 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 F8W8V4 182 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 APRTP07741 180 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 RASSF2P50749 326 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ANO4Q32M45 955 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 P3H1Q32P28 736 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ZNF449Q6P9G9 518 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 CHSY1Q86X52 802 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 LENG9Q96B70 501 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ST6GALNAC4Q9H4F1 302 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ITGB4P16144 1822 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 RAD51CO43502 376 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 SUN1O94901 812 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 HARS2P49590 506 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 MAP3K7CLP57077 242 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 KCNMA1Q12791 1236 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 PAPD7Q5XG87 772 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 NOA1Q8NC60 698 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 C2CD2Q9Y426 696 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 FARP1Q9Y4F1 1045 aaPredicted RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 RASA4BC9J798 803 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 RASA4O43374 803 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 NFICP08651 508 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 YBX3P16989 372 aaKnown RBP eCLIP15.77■□□□□ 0.12
USP47-207ENST00000527733 EPHB2P29323 1055 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 CCT5P48643 541 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 PAPOLAP51003 745 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 MARSP56192 900 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 TAF1BQ53T94 588 aaPredicted RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 NOP9Q86U38 636 aaKnown RBP15.77■□□□□ 0.12
USP47-207ENST00000527733 FBXO32Q969P5 355 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 PAK5Q9P286 719 aa15.77■□□□□ 0.12
USP47-207ENST00000527733 A0A0B4J269 797 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 C3orf70A6NLC5 250 aaPredicted RBP15.77■□□□□ 0.11
USP47-207ENST00000527733 ARF4P18085 180 aaPredicted RBP15.77■□□□□ 0.11
USP47-207ENST00000527733 ACAT1P24752 427 aaKnown RBP15.77■□□□□ 0.11
USP47-207ENST00000527733 ZKSCAN8Q15776 578 aaPredicted RBP15.77■□□□□ 0.11
USP47-207ENST00000527733 ACCSLQ4AC99 568 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 NXNQ6DKJ4 435 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 FAM172AQ8WUF8 416 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 RXFP2Q8WXD0 754 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 PPM1EQ8WY54 764 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 ERP44Q9BS26 406 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 FGFBP2Q9BYJ0 223 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 L2HGDHQ9H9P8 463 aa15.77■□□□□ 0.11
USP47-207ENST00000527733 TNFSF9P41273 254 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 ZNF268Q14587 947 aaPredicted RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 CCNI2Q6ZMN8 369 aaPredicted RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 IRF2BP1Q8IU81 584 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 EMC1Q8N766 993 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 TSPYL2Q9H2G4 693 aaPredicted RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 ARHGAP28Q9P2N2 729 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 MTSS1O43312 755 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 LRG1P02750 347 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 PHLDB3Q6NSJ2 640 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 STMN2Q93045 179 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 ACSF2Q96CM8 615 aaPredicted RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 FAM118BQ9BPY3 351 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 FOXP3Q9BZS1 431 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 GRK4P32298 578 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 GGCXP38435 758 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 FNTAP49354 379 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 TKTL1P51854 596 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 C11orf63Q6NUN7 778 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 SPATS2Q86XZ4 545 aaKnown RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 DNAAF5Q86Y56 855 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 MCUQ8NE86 351 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 EPS8L1Q8TE68 723 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 GANQ9H2C0 597 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 TPX2Q9ULW0 747 aaKnown RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 ST3GAL5Q9UNP4 418 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 AP3B1O00203 1094 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 SMPD1P17405 629 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 SCNN1GP51170 649 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 MCL1Q07820 350 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 PDK2Q15119 407 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 IFNL1Q8IU54 200 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 GANCQ8TET4 914 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 PABPC5Q96DU9 382 aaKnown RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 SENP8Q96LD8 212 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.76■□□□□ 0.11
USP47-207ENST00000527733 LMCD1Q9NZU5 365 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 SH3BP1Q9Y3L3 701 aa15.76■□□□□ 0.11
USP47-207ENST00000527733 COL22A1Q8NFW1 1626 aaPredicted RBP15.75■□□□□ 0.11
USP47-207ENST00000527733 COPEO14579 308 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 MLH1P40692 756 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 NFIL3Q16649 462 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 TMEM86AQ8N2M4 240 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 ATP6V0D2Q8N8Y2 350 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 OR5B17Q8NGF7 314 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 AGAP3Q96P47 875 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 RBM15Q96T37 977 aaKnown RBP eCLIP15.75■□□□□ 0.11
USP47-207ENST00000527733 ARL2P36404 184 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 GRM5P41594 1212 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 MNAT1P51948 309 aa15.75■□□□□ 0.11
USP47-207ENST00000527733 SESN2P58004 480 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms