RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 CCR9P51686 369 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ARFIP2P53365 341 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 TARDBPQ13148 414 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 SCARB2Q14108 478 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 HS1BP3Q53T59 392 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 MAP3K21Q5TCX8 1036 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 RPUSD3Q6P087 351 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ZNF449Q6P9G9 518 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ETV3LQ6ZN32 361 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM47EQ6ZV65 393 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 KRT74Q7RTS7 529 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 GALNTL5Q7Z4T8 443 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 MIB1Q86YT6 1006 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM126BQ8IXS8 530 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 TXNDC5Q8NBS9 432 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 APPL2Q8NEU8 664 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 OR1N1Q8NGS0 311 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 BRIX1Q8TDN6 353 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 IGDCC4Q8TDY8 1250 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 KBTBD7Q8WVZ9 684 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 GAB3Q8WWW8 586 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 SNX21Q969T3 373 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 NSUN4Q96CB9 384 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 NEIL1Q96FI4 390 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 MRGPRX4Q96LA9 322 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 TWNKQ96RR1 684 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 PRPF18Q99633 342 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 FOXB1Q99853 325 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 PRDM13Q9H4Q3 707 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 SEPSECSQ9HD40 501 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 RBM12Q9NTZ6 932 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 TDP1Q9NUW8 608 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 DTLQ9NZJ0 730 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 RGL1Q9NZL6 768 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 HERC5Q9UII4 1024 aaKnown RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 ASB1Q9Y576 335 aa4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 RSF1Q96T23 1441 aaPredicted RBP4.28□□□□□ -1.72
CLNS1A-208ENST00000527265 TDRD9Q8NDG6 1382 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PRAMEF22A3QJZ6 481 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 C9orf118A6NHY6 69 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 FCHO1O14526 889 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SPTLC2O15270 562 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 GPR42O15529 346 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 OPHN1O60890 802 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 FSBPO95073 299 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ZNF202O95125 648 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MLYCDO95822 493 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 LRG1P02750 347 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TK1P04183 234 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 CLTBP09497 229 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 CSF1P09603 554 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 GYS1P13807 737 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 IL1R1P14778 569 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 RXRAP19793 462 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MALP21145 153 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SCP2P22307 547 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MAPK4P31152 587 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 CARSP49589 748 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 COPAP53621 1224 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 BPIFB3P59826 476 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ACTR2P61160 394 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 HERVK_113P62684 666 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ROM1Q03395 351 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SNAPC2Q13487 334 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 RASA2Q15283 850 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 DNAJC21Q5F1R6 531 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 SNX30Q5VWJ9 437 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PRAMEF18Q5VWM3 479 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ARHGEF18Q6ZSZ5 1173 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 BBS12Q6ZW61 710 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TMTC3Q6ZXV5 915 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 UNC13DQ70J99 1090 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 RNF44Q7L0R7 432 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 RTL10Q7L3V2 364 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 KDELC2Q7Z4H8 507 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MICU3Q86XE3 530 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PPP1R3BQ86XI6 285 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 GATAD2AQ86YP4 633 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 LMNTD2Q8IXW0 634 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 NGEFQ8N5V2 710 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 AMER2Q8N7J2 671 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TTLL6Q8N841 843 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 KYQ8NBH2 561 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 OR6B3Q8NGW1 331 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 HOXB13Q92826 284 aaPredicted RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 ATP2A3Q93084 1043 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TBC1D31Q96DN5 1066 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 TOE1Q96GM8 510 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 JAKMIP1Q96N16 626 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 DDX23Q9BUQ8 820 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MAGEB5Q9BZ81 275 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 DPH1Q9BZG8 443 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 XPO4Q9C0E2 1151 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 PABPC3Q9H361 631 aaKnown RBP4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 RNPEPQ9H4A4 650 aa4.27□□□□□ -1.73
CLNS1A-208ENST00000527265 MTG2Q9H4K7 406 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms