RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 BBS12Q6ZW61 710 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 XYLT1Q86Y38 959 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 EXOC8Q8IYI6 725 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 ZBED8Q8IZ13 594 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 EMC1Q8N766 993 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 CCDC63Q8NA47 563 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 COPS5Q92905 334 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 KIF9Q9HAQ2 790 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 UBN1Q9NPG3 1134 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 HMGXB4Q9UGU5 601 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 GPR25O00155 361 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 NOP56O00567 594 aaKnown RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 NFICP08651 508 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 CD48P09326 243 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 KDELR1P24390 212 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 POLR2BP30876 1174 aaKnown RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 CLCN3P51790 818 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 GPX6P59796 221 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 MGAT5Q09328 741 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 PDIA2Q13087 525 aaKnown RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 NR1H3Q13133 447 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 MTFR1Q15390 333 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 ANKRD22Q5VYY1 191 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 CCDC62Q6P9F0 684 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 CXorf38Q8TB03 319 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 ASCC2Q9H1I8 757 aaPredicted RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 TXNRD2Q9NNW7 524 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 TNFSF13BQ9Y275 285 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 UTRNP46939 3433 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 CLUHO75153 1309 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 SRCAPQ6ZRS2 3230 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 IRF6O14896 467 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 PRPF4O43172 522 aaKnown RBP eCLIP21.42■■□□□ 1.02
SMIM3-201ENST00000526627 CST8O60676 142 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 KRT19P08727 400 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 BNIP1Q12981 228 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 CAPN12Q6ZSI9 719 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 CENPUQ71F23 418 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 SLC4A11Q8NBS3 891 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 RMDN2Q96LZ7 410 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 SPATA33Q96N06 139 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 SMYD3Q9H7B4 428 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 VPS37BQ9H9H4 285 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 METTL5Q9NRN9 209 aaKnown RBP21.42■■□□□ 1.02
SMIM3-201ENST00000526627 AGTPBP1Q9UPW5 1226 aa21.42■■□□□ 1.02
SMIM3-201ENST00000526627 A0A0G2JLL6 359 aaPredicted RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 MED7O43513 233 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 KRT7P08729 469 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 IRX3P78415 501 aaPredicted RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 PDE4CQ08493 712 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 ZNF667Q5HYK9 610 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 EFCAB12Q6NXP0 572 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 PRRT2Q7Z6L0 340 aaPredicted RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 ANKLE1Q8NAG6 615 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 CPT1BQ92523 772 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 WDR83Q9BRX9 315 aaKnown RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 ELOVL4Q9GZR5 314 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 TRABDQ9H4I3 376 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 RPF1Q9H9Y2 349 aaKnown RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 DNAJC25-GNG10A0A024R161 153 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 GOLGA8MH3BSY2 632 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 MAGEB2O15479 319 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 IL18RAPO95256 599 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 CTCFP49711 727 aaPredicted RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 IL9RQ01113 521 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 TFDP1Q14186 410 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 RASA2Q15283 850 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 MSS51Q4VC12 460 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 FBXO16Q8IX29 292 aaPredicted RBP21.41■■□□□ 1.02
SMIM3-201ENST00000526627 GPC2Q8N158 579 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 FITM2Q8N6M3 262 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 NAT8LQ8N9F0 302 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 GRID1Q9ULK0 1009 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 MCM3APO60318 1980 aa21.41■■□□□ 1.02
SMIM3-201ENST00000526627 CFAP73A6NFT4 308 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 RPL22P35268 128 aaKnown RBP21.4■■□□□ 1.02
SMIM3-201ENST00000526627 SLC18A1P54219 525 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 TAF5Q15542 800 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 Q3C1V9 767 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 FNBP1LQ5T0N5 605 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 ANKMY2Q8IV38 441 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 PNMA3Q9UL41 463 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 ZMYND8Q9ULU4 1186 aaPredicted RBP21.4■■□□□ 1.02
SMIM3-201ENST00000526627 CSADQ9Y600 493 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 LACTBL1A8MY62 500 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 HIF1AQ16665 826 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 HADHQ16836 314 aaKnown RBP21.4■■□□□ 1.02
SMIM3-201ENST00000526627 EFHC2Q5JST6 749 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 RNF43Q68DV7 783 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 DHX37Q8IY37 1157 aaKnown RBP21.4■■□□□ 1.02
SMIM3-201ENST00000526627 MAGEC3Q8TD91 643 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 FRMD8P1Q9BZ68 369 aaPredicted RBP21.4■■□□□ 1.02
SMIM3-201ENST00000526627 ECT2Q9H8V3 914 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 RXFP1Q9HBX9 757 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 RABGEF1Q9UJ41 708 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 EVPLQ92817 2033 aa21.4■■□□□ 1.02
SMIM3-201ENST00000526627 NDC80O14777 642 aa21.39■■□□□ 1.02
SMIM3-201ENST00000526627 MICAL2O94851 1124 aa21.39■■□□□ 1.02
SMIM3-201ENST00000526627 PTPN11Q06124 597 aaPredicted RBP21.39■■□□□ 1.02
SMIM3-201ENST00000526627 MYO1EQ12965 1108 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms