RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 ARHGAP29Q52LW3 1261 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 VPS53Q5VIR6 699 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF425Q6IV72 752 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 EPM2AIP1Q7L775 607 aaPredicted RBP3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 TCEAL8Q8IYN2 117 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF366Q8N895 744 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 KLHDC4Q8TBB5 520 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 DIS3LQ8TF46 1054 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 TNPO1Q92973 898 aaKnown RBP3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 RGMAQ96B86 450 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 FAM136AQ96C01 138 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 C1orf43Q9BWL3 253 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 ARHGEF3Q9NR81 526 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 PNPOQ9NVS9 261 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 RLIMQ9NVW2 624 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 SH3BP4Q9P0V3 963 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 ABCF2Q9UG63 623 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 SERGEFQ9UGK8 458 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 AGAP1Q9UPQ3 857 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 RAD54BQ9Y620 910 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 SYNJ1O43426 1573 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 ABCC8Q09428 1581 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 CUX1P39880 1505 aa3.29□□□□□ -1.88
ECHDC1-218ENST00000525745 AQRO60306 1485 aaKnown RBP eCLIP3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ATAD2BQ9ULI0 1458 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF804BA4D1E1 1349 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 KAT6AQ92794 2004 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 CCER2I3L3R5 266 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SMIM22K7EJ46 135 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 PPM1DO15297 605 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 PRPF3O43395 683 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SOAT2O75908 522 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 NXPH3O95157 252 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ALDH2P05091 517 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 RARBP10826 455 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 KELP23276 732 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 MPGP29372 298 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 PRDX5P30044 214 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 NOGQ13253 232 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 NXNQ6DKJ4 435 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC29A4Q7RTT9 530 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ZNF551Q7Z340 670 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 HEATR3Q7Z4Q2 680 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 C14orf80Q86SX3 495 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 MAGEB6Q8N7X4 407 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ATRIPQ8WXE1 791 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 CDK5RAP3Q96JB5 506 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 FAM167AQ96KS9 214 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 CGRRF1Q99675 332 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ACO2Q99798 780 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 TINAGL1Q9GZM7 467 aaPredicted RBP3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SIK2Q9H0K1 926 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SLC12A5Q9H2X9 1139 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 WDCPQ9H6R7 721 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ARMT1Q9H993 441 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 GPR35Q9HC97 309 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 NRIP3Q9NQ35 241 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 ANLNQ9NQW6 1124 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SERTAD4Q9NUC0 356 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 LMBRD1Q9NUN5 540 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 PCDHA1Q9Y5I3 950 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 NCAPD3P42695 1498 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 CCDC18Q5T9S5 1454 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 FYCO1Q9BQS8 1478 aa3.28□□□□□ -1.88
ECHDC1-218ENST00000525745 SOGA1O94964 1423 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 FMN1Q68DA7 1419 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 AKNAQ7Z591 1439 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 PRSS29PA6NIE9 313 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 M0QYG6 137 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TP73O15350 636 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 PARNO95453 639 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 GNAI2P04899 355 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 FAM163BP0C2L3 166 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 FTH1P19P0C7X4 201 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TYRP14679 529 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 JUPP14923 745 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 PCSK6P29122 969 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 EPHB2P29323 1055 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 GCLCP48506 637 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 ALDH9A1P49189 494 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 CLCN2P51788 898 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 KIF22Q14807 665 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 GFOD2Q3B7J2 385 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TEDDM1Q5T9Z0 273 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 CEP85Q6P2H3 762 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 B3GNT9Q6UX72 402 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TMEM108Q6UXF1 575 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 ZNF66Q6ZN08 573 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 YTHDF3Q7Z739 585 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 DAAM2Q86T65 1068 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 USP37Q86T82 979 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 DENND1CQ8IV53 801 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 FANCBQ8NB91 859 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TTC8Q8TAM2 541 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 TAAR9Q96RI9 348 aa3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 SARS2Q9NP81 518 aaKnown RBP3.27□□□□□ -1.89
ECHDC1-218ENST00000525745 SERHLQ9NQF3 203 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms