RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 CILPO75339 1184 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 ETS1P14921 441 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 GABRB2P47870 512 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 LRRC14Q15048 493 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 BBS12Q6ZW61 710 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 CENPUQ71F23 418 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 TTC39CQ8N584 583 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 ANKRD42Q8N9B4 389 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 CKAP2Q8WWK9 683 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 FAM124BQ9H5Z6 455 aaPredicted RBP17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 UBN1Q9NPG3 1134 aa17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 METTL5Q9NRN9 209 aaKnown RBP17.36■□□□□ 0.37
CCDC90B-203ENST00000525503 DNM1LO00429 736 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 MICAL2O94851 1124 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 HMGCRP04035 888 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 VDRP11473 427 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 CETPP11597 493 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 CREB1P16220 341 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 KDELR1P24390 212 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 HNRNPH1P31943 449 aaKnown RBP17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 SCTRP47872 440 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 AMHR2Q16671 573 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 CCDC142Q17RM4 750 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 CYP4X1Q8N118 509 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 GTF3C2Q8WUA4 911 aaPredicted RBP17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ZBTB10Q96DT7 871 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 CPXM1Q96SM3 734 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 TMEM121Q9BTD3 319 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 PHACTR1Q9C0D0 580 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ELOVL4Q9GZR5 314 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 PDZD7Q9H5P4 517 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 EURLQ9NYK6 297 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 TBK1Q9UHD2 729 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 COL1A2P08123 1366 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 A0A087WZ62 844 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 TCP11X1B4DZS4 312 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ALOX15BO15296 676 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 RNF8O76064 485 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 GH1P01241 217 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ERBB2P04626 1255 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 LGALS2P05162 132 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 TMEM63BQ5T3F8 832 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 MOB2Q70IA6 237 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ARMCX2Q7L311 632 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 SRRM1Q8IYB3 904 aaKnown RBP17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 LINC01465Q8N7H1 131 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 MCRS1Q96EZ8 462 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 FDXACB1Q9BRP7 624 aaPredicted RBP17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 MIS12Q9H081 205 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 ASNSD1Q9NWL6 643 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 AKT3Q9Y243 479 aa17.35■□□□□ 0.37
CCDC90B-203ENST00000525503 RASA4BC9J798 803 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 M0QYV0 167 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 RASA4O43374 803 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 SNX3O60493 162 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 CST8O60676 142 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 IFNB1P01574 187 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 GSTA1P08263 222 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 IL1R2P27930 398 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 STX2P32856 288 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 OTUD4Q01804 1114 aaKnown RBP17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 TMEM132DQ14C87 1099 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 TMED2Q15363 201 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 SMTNL2Q2TAL5 461 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 SUGP1Q8IWZ8 645 aaKnown RBP17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 ARFGAP1Q8N6T3 406 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 KCTD6Q8NC69 237 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 CXorf38Q8TB03 319 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 ACTL9Q8TC94 416 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 MAML1Q92585 1016 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 PRCCQ92733 491 aaPredicted RBP17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 HPDLQ96IR7 371 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 PLCD4Q9BRC7 762 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 ITGA11Q9UKX5 1188 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 KIAA1257Q9ULG3 409 aa17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.34■□□□□ 0.37
CCDC90B-203ENST00000525503 DYNLT1P63172 113 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 PPIL6Q8IXY8 311 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 PPTC7Q8NI37 304 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 RSAD2Q8WXG1 361 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 MAGEB18Q96M61 343 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 HEXIM2Q96MH2 286 aaKnown RBP17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 TWNKQ96RR1 684 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 VTA1Q9NP79 307 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 RNF181Q9P0P0 153 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 SENP1Q9P0U3 644 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 PNMA3Q9UL41 463 aa17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 USP15Q9Y4E8 981 aaPredicted RBP17.33■□□□□ 0.37
CCDC90B-203ENST00000525503 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.36
CCDC90B-203ENST00000525503 SMAPO00193 183 aa17.33■□□□□ 0.36
CCDC90B-203ENST00000525503 DNAJC8O75937 253 aaPredicted RBP17.33■□□□□ 0.36
CCDC90B-203ENST00000525503 SUN1O94901 812 aa17.33■□□□□ 0.36
CCDC90B-203ENST00000525503 STAU1O95793 577 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms